<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09718
Description |
Mediator of RNA polymerase II transcription subunit 27 |
Sequence | MMQQAQAHTSALAGAPSASAVAPTVAHPHDPVGGDAPPKQVAQAMERLGRAGRFIADIRLGADRLLEALFVSGDAPPYSVRQHVDRMERIIVKEDAAMRLHFQDLRALGRLPIQHARIQFTDGLQTSSFILQSPARANPVFFIGMSSSSGEFGRRHQDNVEVIFPESQVVGSGRQLEESGVLNGALKAQGNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDEVVSHLHDGQPGDTKKSKLFTSNGYLEEKSLSEILKNLEHEVPNIKIFTYWHLDWSKRASSLASLLDDDFVDPSKELNLQNMDKSRSDALTTTIDQVAVIELLVPSIFRAVVSLHPAGSTDPDAVAFFSPTEGGSYLHARGTSVHHVFKHVKEHADKALQYFINAEPSKALPLLLRWIASYQTLFTKVCSKCRRLLMMDKSLALLLPPVHRPYHQTSNVGPDLQEAYHIGCSSYDG |
Length | 483 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.249 |
Instability index | 43.56 |
Isoelectric point | 7.10 |
Molecular weight | 53210.86 |
Publications | PubMed=19965430
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP09718
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 61.58| 18| 19| 58| 75| 1
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32- 70 (18.77/ 8.42) VGGDAppkqvaqamerlgragrfiadIRLGADRLLEALF
71- 91 (24.04/12.58) VSGDA.................ppysVRQHVDR.MERII
92- 108 (18.77/ 8.42) VKEDA....................aMRLHFQDL.RAL.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 53.18| 16| 19| 112| 128| 2
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112- 128 (24.25/21.62) PIQHARIQFTdGLQTSS
134- 149 (28.93/20.01) PARANPVFFI.GMSSSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 81.23| 25| 25| 244| 268| 3
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244- 268 (42.11/32.10) HLEDEVVSHLHDGQPGDTKKSKLFT
272- 296 (39.11/29.26) YLEEKSLSEILKNLEHEVPNIKIFT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 71.53| 20| 201| 5| 24| 4
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5- 24 (34.85/18.98) AQAHTSALAGAPSASAVAPT
208- 227 (36.68/20.30) AYAWKRQLAGQAGASAVDRT
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