<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09706
Description |
Mediator of RNA polymerase II transcription subunit 33A |
Sequence | MLLALIPLSIAAILQEESDMFGVEGNKILPQRQGLISSLQDLIQYSGLLVPPSSVVNAANAAASKAAIFKANYKAGAGNTSMMDQTDSSMKAAGNMLHLIIEACISRKLIDTSAYLWHGYVVPSRTLKDTALPQESPWLNFMKGSQLSEPLIDALVATPASSVAELDKLYSVATNGSEEEKTAAAKILCGASLVRGWNIQEHVVSMVVKLLSASLPSDSSTSTPGSMSHYLAHMSTLNEILLGVSYGDVIHILSLYGMVPDVAVALMPLCEAFGSIAPPPNHKSTILGETSVYLVFSCAFLCLLRLWKFYRPPQEYCLTGRGGSVKLELTLDYLLLMHNNRIFSNSSAPNRDSYNSMGSVNEVSAQPIYIDSFPKLSAWYFQNQACIASTLSGLCNKNPVHQVANKILNMICRKMNKGGVSSSNLSSTSSSSVSGSSVSASDDSYQRPAVPAWEFLEAVPFVLEAVLTACAHGRLSSRDLTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKPVPMNGTEWPSPGASLHSIEAEVKEILASAGVQINSCYPRGVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGHALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCMRSPFGRDKDAVAQLIRSCFSSFLQSSSSGSDIIANRGVGALLGDSITDQGLRLPMAPGFVYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWSFNGPPQLKSGRTPLSCAASMAHQVAMLGGGLLCIAGGPLVVQVLYEDTLPTLLLSAREQSLKDPGPVSSTLQGYAMANMLFYCGSLLWGADRSSPVMKLSFLSRRPRVVRNHMDFIAGVLDGHILLGCDPGTWKAYVSQFMFLVVKFVPSWLPDIKLDTLKKIAAGLRSWHEHDLALSLLERGGPQAISVVVETFL |
Length | 914 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.189 |
Instability index | 51.31 |
Isoelectric point | 7.25 |
Molecular weight | 98801.14 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP09706
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.71| 22| 76| 503| 524| 1
---------------------------------------------------------------------------
503- 524 (45.08/23.93) SAEITRGIWKPVPMN...GTEWPS.P
577- 602 (32.63/15.54) SLEYIQGVIGHALENcagGSSWPSmP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 106.70| 31| 121| 220| 254| 2
---------------------------------------------------------------------------
220- 250 (54.96/42.11) STSTPGSMSHYLAH.MSTLNEILLGVSYGDVI
727- 758 (51.74/29.08) SGRTPLSCAASMAHqVAMLGGGLLCIAGGPLV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 204.05| 65| 71| 309| 379| 3
---------------------------------------------------------------------------
309- 379 (105.22/93.91) FyrpPQEYC....LTGRGGSVKLELTLDYLLLMHNNRIFSNSSAPNRDSYNSMGSVN..EVSAQPiyiDSF..PKLSAW
381- 453 (98.83/70.16) F...QNQACiastLSGLCNKNPVHQVANKILNMICRKMNKGGVSSSNLSSTSSSSVSgsSVSASD...DSYqrPAVPAW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 187.03| 44| 496| 255| 307| 4
---------------------------------------------------------------------------
255- 301 (71.24/51.58) LYgmvPDVAVALMPLCEAFGSIAP..PPNHKSTILGETSVYLVFSCAFL
762- 804 (70.17/41.88) LY...EDTLPTLL.LSAREQSLKD..PGPVSSTLQGYAMANMLFYCGSL
808- 846 (45.62/28.06) .....ADRSSPVMKL..SFLSRRPrvVRNHMDFIAGVLDGHILLGC...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.97| 16| 443| 29| 45| 9
---------------------------------------------------------------------------
29- 45 (23.98/14.75) LPQRQgLISSLQDLIQY
475- 490 (26.99/12.36) LSSRD.LTTSLRDLVDF
---------------------------------------------------------------------------
|