<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09661
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAGELGQQTVELGAVVRRAAEESYLALRELVEKSQAEAEGKGIGAGANGSWQRSDTEKKIDLLKFITRTRQRMLRLHVLAKWCQQVPLVHYCQQLGSTLHSHETCFTQTADSLFYMHECLQQARAPMFDVPSAIEVMLTGGYQRLPRCIEEIGSQHKLSPDEEKRALRKLDASVRYRVLVTPRPKEVSNVSVTDGIAVFRVDGEFKILLTLGYRGNVDLWRILHMELLVGEKKGPIKLDESRRFALGDDIERRMAASENPFAVLYAILHEFCISLAMDTIIKQANVLRQGRWKDAIRSELISDSATVQTGNTPLMQLVQDAEFDSSGFKIPGLKVNYWLDEKSTSTAEPDSSPFIKIEAGLDMQIKCQHSSFILDPFTDKEASLSLDLSCIDVEQLILRAVSCNRHTRLLNIQRQLCKNVQIFQSPKDVVLTRDVAAAKDPMMNAEKGFSDCFGNEVLQVRACGQAYVSLGINIRSGRFLLQSPENILPRAALMDCEEALNKGSTSATEVFSSLRTRSILHLLAATGSFFGLKVYQQSQGTLKIPKTLLHGSDLMVMGFPHCANAYYLLMQLDKDFRPVFHLLETQCDANGNTNASGDVKEAIRYNKINIGQMQILKNEMNENPFDVKLQALQSLVDSADMMESDLPVQNAIEPLPLLPACSPSFSSIVDEVFEYERGSTAAQNRCLPVDIQGINARVVSPMHDGCLSYTQANNNMNVHPNVSLNSYFPSNFRHLQGTNTFSSNPVMSMTKLSGSNSNHDLCSLSSPYDYDIAGANKSLQLVPSSNDNSNQIPAQSSHSGNLGNATPGHLIGSSTTTGGLGKLITAGSDGASRKHYLSDFLSSIPSLRGLQPSEPRKRRKKTESVQSLLPLQAHSSNLQSRGSLTYGDVLAERNNCVPATIYASVLLHVIRHCSLCIKHAQLTAQMDSLAIPYVEEVGLRRPSSNLWLRLPFAQDDSWNHICLRLGKAGSMSWDVRINDPHFRELWELNGGSTKTQWGVGIRIANSSEMDSHISFDSSGVVLTYNTVEADSVQKLVSDLRRLSNARSFALGMRRLIGVKFQDKLDDNQLTMEVKSQSVNKGNSDAADKLSEQMRKTFRIEAVGLMSLWFSYGTMPMVHIVVEWEIAKAGCTMHVSPDQLWPHTKFLEDFVNGGEVASFLDCIRLTAGPLLALGGAIRPARMPVAVSSGYSSMPKQPNIPTQGPLVNGSSSTIHHAPGPSNAASAHLGSHNLHAAAMLSAVGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNALEPNFMNATQASGHLNNNAGVPQTAPSANRLNATPGVSMVRPTSGVANHVAASLSRAGNAMLASSALASGISGTSVRLTAGAGLPVHMKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPELLKEILGSILKDNEGALLNLDQEQPALRFYVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQAQSNAQEELAAVEINEICDYFSRRVASEPYDASRVASFITLLTLPILVLREFLKLITWKKGLSPVHGDIATAQRARIELCLENHSGSASSDNTENSSLAKSNIHHDRAHSSVEFALTFVLDHALIPHMNVAGGAAWLPYCVSVKLRYSFGDNNHIAFLAMNGSHGGRACWLQFEEWERCKQKVSRAVETVNGSGVAGEVGQGRLRMVAEMIQKQLQLCLQQLRDDPLSAGSTAS |
Length | 1758 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.165 |
Instability index | 49.17 |
Isoelectric point | 7.84 |
Molecular weight | 192493.58 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
plasmodesma GO:0009506 IEA:EnsemblPlants
|
GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central
|
GO - Biological Process | cold acclimation GO:0009631 IEA:EnsemblPlants
positive regulation of cell population proliferation GO:0008284 IEA:EnsemblPlants
regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
systemic acquired resistance GO:0009627 IEA:EnsemblPlants
|
Interaction
Repeat regions
Repeats |
>MDP09661
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.63| 18| 20| 791| 808| 1
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773- 793 (21.39/10.40) AGANKSLQLvpsSNDNSNQIP
794- 811 (31.25/19.15) AQSSHSGNL...GNATPGHLI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.68| 15| 19| 1339| 1357| 2
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1343- 1357 (26.47/21.38) AGVPQTAPS...ANRLNA
1359- 1376 (22.20/ 6.41) PGVSMVRPTsgvANHVAA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 75.43| 15| 20| 353| 367| 4
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331- 345 (24.35/15.51) PGLKVNYWLDEKSTS
353- 367 (26.89/17.96) PFIKIEAGLDMQIKC
376- 390 (24.18/15.34) PFTDKEASLSLDLSC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 53.36| 17| 18| 1429| 1446| 5
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1429- 1446 (26.52/20.81) Y.GGGWVpLAALKKVLRGI
1449- 1466 (26.84/15.08) YlGVLWL.FAQLPELLKEI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 165.09| 52| 59| 424| 482| 6
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424- 476 (84.82/66.31) QSPKDvVLTRDVAAAKDPMMN.....AEKGFSDCFGNEVLQVRACGQAYVSLGINIRS
482- 538 (80.27/48.25) QSPEN.ILPRAALMDCEEALNkgstsATEVFSSLRTRSILHLLAATGSFFGLKVYQQS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 147.93| 42| 405| 1247| 1290| 8
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1247- 1290 (73.35/50.50) LVP.......SSLLPFDVSVVLRgpYWIRIIYRKKFSVDMRCFAGDQVWLQ
1648- 1696 (74.58/44.65) LIPhmnvaggAAWLPYCVSVKLR..YSFGDNNHIAFLAMNGSHGGRACWLQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.73| 15| 18| 686| 701| 10
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686- 701 (23.13/19.21) CLPVdIQGINARVVSP
706- 720 (29.60/19.27) CLSY.TQANNNMNVHP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 209.83| 72| 670| 160| 325| 11
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161- 247 (89.29/148.19) DEEKRALRKLD.ASVRYRVLVTPRpkeVSNVSVTDGIAVFRVDGefkILLTlgYrGNVDLWRIlhmELLVGEKKgpiKLDESRRFALG
979- 1051 (120.54/52.34) DPHFRELWELNgGSTKTQWGVGIR...IANSSEMDSHISFDSSG...VVLT..Y.NTVEADSV...QKLVSDLR...RLSNARSFALG
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