<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09660
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAGELGQQTVELGAVVRRAAEESYLALRELVEKSQAEAEGKGIGAGANGSWQRSDTEKKIDLLKFITRTRQRMLRLHVLAKWCQQVPLVHYCQQLGSTLHSHETCFTQTADSLFYMHECLQQARAPMFDVPSAIEVMLTGGYQRLPRCIEEIGSQHKLSPDEEKRALRKLDASVRYRVLVTPRPKEVSNVSVTDGIAVFRVDGEFKILLTLGYRGNVDLWRILHMELLVGEKKGPIKLDESRRFALGDDIERRMAASENPFAVLYAILHEFCISLAMDTIIKQANVLRQGRWKDAIRSELISDSATVQTGNTPLMQLVQDAEFDSSGFKIPGLKVNYWLDEKSTSTAEPDSSPFIKIEAGLDMQIKCQHSSFILDPFTDKEASLSLDLSCIDVEQLILRAVSCNRHTRLLNIQRQLCKNVQIFQSPKDVVLTRDVAAAKDPMMNAEKGFSDCFGNEVLQVRACGQAYVSLGINISFLLQSPENILPRAALMDCEEALNKGSTSATEVFSSLRTRSILHLLAATGSFFGLKVYQQSQGTLKIPKTLLHGSDLMVMGFPHCANAYYLLMQLDKDFRPVFHLLETQCDANGNTNASGDVKEAIRYNKINIGQMQILKNEMNENPFDVKLQALQSLVDSADMMESDLPVQNAIEPLPLLPACSPSFSSIVDEVFEYERGSTAAQNRCLPVDIQGINARVVSPMHDGCLSYTQANNNMNVHPNVSLNSYFPSNFRHLQGANKSLQLVPSSNDNSNQIPAQSSHSGNLGNATPGHLIGSSTTTGGLGKLITAGSDGASRKHYLSDFLSSIPSLRGLQPSEPRKRRKKTESVQSLLPLQAHSSNLQSRGSLTYGDVLAERNNCVPATIYASVLLHVIRHCSLCIKHAQLTAQMDSLAIPYVEEVGLRRPSSNLWLRLPFAQDDSWNHICLRLGKAGSMSWDVRINDPHFRELWELNGGSTKTQWGVGIRIANSSEMDSHISFDSSGVVLTYNTVEADSVQKLVSDLRRLSNARSFALGMRRLIGVKFQDKLDDNQLTMEVKSQSVNKGNSDAADKLSEQMRKTFRIEAVGLMSLWFSYGTMPMVHIVVEWEIAKAGCTMHVSPDQLWPHTKFLEDFVNGGEVASFLDCIRLTAGPLLALGGAIRPARMPVAVSSGYSSMPKQPNIPTQGPLVNGSSSTIHHAPGPSNAASAHLGSHNLHAAAMLSAVGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNALEPNFMNATQASGHLNNNAGVPQTAPSANRLNATPGVSMVRPTSGVANHVAASLSRAGNAMLASSALASGISGTSVRLTAGAGLPVHMKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPELLKEILGSILKDNEGALLNLDQEQPALRFYVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQAQSNAQEELAAVEINEICDYFSRRVASEPYDASRVASFITLLTLPILVLREFLKLITWKKGLSPVHGDIATAQRARIELCLENHSGSASSDNTENSSLAKSNIHHDRAHSSVEFALTFVLDHALIPHMNVAGGAAWLPYCVSVKLRYSFGDNNHIAFLAMNGSHGGRACWLQFEEWERCKQKVSRAVETVNGSGVAGEVGQGRLRMVAEMIQKQLQLCLQQLRDDPLSAGSTAS |
Length | 1718 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.154 |
Instability index | 48.90 |
Isoelectric point | 7.85 |
Molecular weight | 188199.93 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
plasmodesma GO:0009506 IEA:EnsemblPlants
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | cold acclimation GO:0009631 IEA:EnsemblPlants
positive regulation of cell population proliferation GO:0008284 IEA:EnsemblPlants
regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
systemic acquired resistance GO:0009627 IEA:EnsemblPlants
|
Interaction
Repeat regions
Repeats |
>MDP09660
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.98| 13| 15| 751| 763| 1
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751- 763 (23.35/12.21) QIPAQSSHSGNLG
769- 781 (22.63/11.60) HLIGSSTTTGGLG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 190.01| 47| 59| 445| 491| 2
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381- 437 (46.17/26.12) .EASLSldlSCIDVEQLILRAvsCNRHTRLLNIqrqlckNVQ.IFQSPKDvVLTRDVAA
445- 491 (78.22/49.64) AEKGFS...DCFGNEVLQVRA..CGQAYVSLGI......NISFLLQSPEN.ILPRAALM
504- 552 (65.62/40.40) ATEVFS...SLRTRSILHLLA..ATGSFFGLKV....yqQSQGTLKIPKT.LLHGSDLM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.36| 15| 17| 1298| 1314| 4
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1300- 1314 (27.45/18.80) NNNAGVPQTAPS...ANR
1316- 1333 (22.91/ 7.56) NATPGVSMVRPTsgvANH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.83| 18| 19| 1389| 1407| 6
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1389- 1407 (28.25/28.49) Y.GGGWVpLAALKKVLRGIL
1409- 1427 (28.57/21.20) YlGVLWL.FAQLPELLKEIL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 63.66| 21| 409| 1207| 1250| 7
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725- 745 (38.98/ 7.06) FPSNFRHLQGANKSLQLVPSS
1207- 1211 (-0.40/ 6.30) ................LVPSS
1235- 1250 (25.07/19.40) FSVDMRCFAGDQVWLQ.....
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.77| 11| 15| 718| 728| 8
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718- 728 (20.79/11.77) NVSLNSYFPSN
736- 746 (17.98/ 9.17) NKSLQLVPSSN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 118.55| 42| 594| 240| 289| 9
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240- 289 (54.71/71.77) ESR.RFALGDDIERRmaASENPfAVLYA..ILH..EFCiSLAmdtiIKQANVLRQ
839- 885 (63.84/48.80) QSRgSLTYGDVLAER..NNCVP.ATIYAsvLLHviRHC.SLC....IKHAQLTAQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 107.32| 34| 645| 152| 189| 10
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152- 189 (48.86/41.07) IGSQHKLSPDEEKRAlRKLDASVRYrvlVTPRPKEVSN
804- 837 (58.45/36.24) IPSLRGLQPSEPRKR.RKKTESVQS...LLPLQAHSSN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.39| 10| 19| 331| 340| 11
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331- 340 (20.38/15.02) PGLKVNYWLD
353- 362 (18.02/12.30) PFIKIEAGLD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 138.10| 42| 592| 656| 709| 13
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656- 709 (66.00/69.40) PACSPSFSSIVDevfeyerGS.TAAQNRCLPVD..IQGINArvvspMHDGCLSYTQA
1251- 1295 (72.11/47.04) PATPPKGGPSVG.......GSlPCPQFRPFIMEhvAQGLNA.....LEPNFMNATQA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.69| 18| 237| 1122| 1139| 15
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1122- 1139 (31.62/20.30) IRLTAGPLLA..LGGAIRPA
1360- 1379 (27.07/16.13) VRLTAGAGLPvhMKGELNTA
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