<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09652
Description |
Mediator of RNA polymerase II transcription subunit 33A |
Sequence | MATSAPPPSSAPWLEWAAEYTKAAQAEARPPPEWAARVAAAAAAAGESEDVPWSAGLAEVLARALFPGGGGGGGGAAPAAAAWKYAEAALAARLASPALLLALLSTRVIPHRLSRPMEYRLYLELLKRHGFNFHHQMKAANFRKCAFPLSDCSLYFLNTMLKSVVWNENQSNRIMDIIERNLRLSKIFGISTCEPGVFVVHFILCIIWQLIDVVLDDEGLLELTPEKNAQWPTRPEDVSTFEGTFTEQRTEKIKKLQKMNTVTTMELIEHLLRDKVITRILSLARENMQSHWGAFTNRLHLLATNSSTLQNSAISLEPFQHLILGDCDAYGETKHNVHKRFHQIVASNPLSSPNGRCLGASYSALWIPIDMYLEDCLDCSIAATNSIEILSGLVKALQAVNRSTWHDAFLALWVASLRLVQREREPIEGPVPHLDTRLCMLLSITTLAIADIIMEADSLCNETELNSHVNEKKAIGNLRNELMLSLQILGDYESLLVPPSCVIPAANQAATKAAMFISGISINNGYMDNVNGMNYTGNMRHLIVESCISRQLLDTSAYYWPGYIMNHANSTSHTLPSQLAGWSSFMKGAPLTQPLVNMLVSTPASRCEHTVRLVVKLLSPSDPIDNSGRESQLIKLGPMLNVILSGISAVDYAPIFSFHGLIPELAASLMAICEVFGCLSPSVSWTLRTGEEISAHTVFSNAFILLLRLWKFNHPPLEYCIMGDGAPVGSQLTPEYLLLLRNSQVLSSSSLSKQRNGQRQSQVSTSHPSSGNPIFMDSFPKLKLWYQQHQACLASTLSGLAHGTPVRNNVDSLLNQMFRKANKGGTSIGSLSGSSSISNSSSPGGDDSHLWPQLPAWEILEAVPFVVDAALTACSHGRLFPRELATGLKDLADFLPASLATIVSYFSAEVTRGVWKPASMNGSDWPSPSVNLSMVDEHIKKIVAATGVDVPKLVTGGSSSGTLPLPLAAFVSLTITYKLDKASECFLNLAGPALENLAASCPWPSMAIVAALWTQKVKRWSDFLIFSASRTVFHHNNDAVVQLLRSCFAATLGMSSTSVCSCGGVASLLGHGYCPGGFSPVAPGILYLRIFRCIKDCSILAEDILSLLMLSVKDIAETTVPRQRPDKLKKTKYGMRHGQVSLSAAMTQVKVAASLGATLVWLSGGTALVQSLIQEMLPSWFLSAQNLDQGGASGGVVYKLGGHALAYFAVYSGMLAWGIDQTPVSRRRERVMRSHLGFLASALAGKIFLGCDLSLWRAYVSGFLGLVVECTPCWVQEVDLRVLKRLSSGLRHWGEDELAVALLRRAGPEAMGTAAEMILGREL |
Length | 1323 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.114 |
Instability index | 41.47 |
Isoelectric point | 7.36 |
Molecular weight | 143799.32 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP09652
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 94.99| 27| 69| 757| 785| 1
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757- 785 (47.44/34.65) GQRQSQVSTSHPSSgnPIFMDS..FPKLKLW
829- 857 (47.55/27.96) GSLSGSSSISNSSS..PGGDDShlWPQLPAW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 146.62| 44| 46| 322| 367| 2
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322- 367 (72.60/48.63) LILGDCDAYGETKHNVHKRFHQIVasNPLSSPNGRCLGASYSALWI
371- 414 (74.02/44.09) MYLEDCLDCSIAATNSIEILSGLV..KALQAVNRSTWHDAFLALWV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 138.00| 35| 73| 1212| 1246| 4
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1212- 1246 (61.12/39.78) SGMLAWGIDQTP..VSRRRERVMRSHLGFLASALAGK
1261- 1284 (20.65/ 8.24) SGFLGLVVECTPcwVQEVDLRVLK.............
1288- 1321 (56.23/35.98) SGLRHWGEDELA..VALLR.RAGPEAMGTAAEMILGR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.32| 15| 20| 90| 104| 5
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90- 104 (23.45/13.63) LAARLASPA...LLLALL
109- 126 (22.87/13.08) IPHRLSRPMeyrLYLELL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 160.95| 52| 886| 189| 255| 6
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189- 255 (74.50/89.55) GISTCEPGVFVVHFILCI..IWQLIDVVLddeGLLELTPeknaqwptrpEDVStfEGTFTEQRTEKIKK
1077- 1130 (86.45/60.35) GFSPVAPGILYLRIFRCIkdCSILAEDIL...SLLMLSV..........KDIA..ETTVPRQRPDKLKK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.62| 22| 71| 881| 904| 8
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881- 904 (29.41/24.59) PReLATGLKDlADFLPASLATIVS
951- 972 (39.21/22.91) PK.LVTGGSS.SGTLPLPLAAFVS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 104.06| 16| 35| 30| 45| 11
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6- 27 (22.80/ 9.76) PPPssapwlEWAAEYTKAAQAE
30- 45 (31.04/16.17) PPP......EWAARVAAAAAAA
50- 64 (23.25/10.11) DVP.......WSAGLAEVLARA
67- 82 (26.97/13.01) PGG......GGGGGGAAPAAAA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.93| 13| 886| 133| 145| 13
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133- 145 (26.46/18.88) FHHQMKAAN..FRKC
1033- 1047 (20.47/12.92) FHHNNDAVVqlLRSC
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