<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09638

Description Uncharacterized protein
SequenceMASLSSPWVEWAGEYTKAAQAEALPPNEWAARVATAAAAAGERGDVQFSAGLAEMLARVVLSGESSGAAPAAAWKYAEAALAARLASPALLLTLLSSRVIPQRVARPTAYRLYLELLRRHGFKLCFQMKAANSNKIRQLIDDNLNLSQIFGFSACEPGVFIVEFVLCILWQLVDTALDDESLLELTPEKKAQWPTRPQDISAFEVSFSEQKPEKIEKLQRMNSVITIELIGHLLHNKVITRILSLARENMQTQWGLFTYRLRLLVANSSTLQASTMSLVAFQQLILDDHNVHGENKHSLHKKFHPMVASNPLSSPNGHCLGGSYSALWTPIDMYLEDCLDGSIAATNSIEILSGLVKALQAVNRSSWHDAFMALWIASVRLVQREREPIEGPVPHLETRLCMLLSIATLAVADIIEEADSRCGETDLSSHWKQKTATDDLRKELMLSLQALGDYESLLVPPPCIISAANQAASKAAMLVSGINSSSGYMESINETGNMRHLIVESCISRNLLDTSAYYWPGYINGHVNSMSHAIPSQLAGWAAFMKGTPLTQSLVSVLVSSPASSLAELEKLFEVAVNGSDDDKVSAATVLCGATLLRGWNFQEHTVRLVVKLLSHSDPADYSGRESQLIKHGPMLNVILTGISPVDYAPIFSFHGLVPELATVLMAICEVFGCLSPSVSWTLGAGEEISAHTVFSNAFILLLRLWKFNHPPLEYCIMGDGAPVGSQLTPEYLLLLRNSQVLSASSSSKSRSSQKQLPVTSSQSSQNPIFMDSFPKLKLWYRQHQACLASPLSGLAHGTPVHNIVDSLLNLMFRKANKGSTSIGSVSGSSSISNSSGPGDDGSHLWPQLPAWEILEAVPFVVDAALTACSHGRLFPRELATGLKDLADFLPASTATIVSYFSAEVTRGVWKPAFMNGTDWPSPAANLSMVEEHIKKIVAATGVDVPRLATGGTTLGRLPLPLAAFVSLTITYKLDKASERFLNLAGPALENLAASCPWPSMAIVAALWTQKVKRWSDFLVFSASRTVFHHNNDAVVQLLRSCFTSILGMSSTSLCCCGGVASLLGHGFGSHCSGGLSPVAPGILYLRIFRCIKDCSILAEDILSLLMLSVKDIAETTVSRHGSDKLKRTKYAMGHGKISLATAMTQVKVAASLGATLVWLSGGTTLVQSLFQEMLPSWFLSAQDLDRGGASGGTVYKLGGHALAYFAVYSGMFAWGIDPTPVSRRRERVMRSHLEFLASALDGKISLGCNMSLWRAYVSGFLGLVVDRAPCLLHEVDLKVLKKLSIGLRQWKEKELAVAILCRGGPEAMGVAAELILDSEW
Length1321
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy0.148
Instability index41.60
Isoelectric point6.76
Molecular weight143135.44
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09638
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     437.62|     170|     367|     541|     826|       1
---------------------------------------------------------------------------
  617-  700 (70.19/154.64)	...................................................................................................................SDPADySGreSQLIKHGPMLNvILTGIsP..VDYAPIFSFHG.LVP.ELATVLMAICEVFGCLSPSVSWTLGAgeEISaHTVFSNAFI
  726-  915 (259.99/143.73)	SQLTPEYLLLLRNSqVLSASSSSKSRSSQKQLPVTSSQSSQNPI.FMDSFPKLKLwyrqhQACLASPLSGLAHGT.pVHNIVDSLLNLMFRKA...NKGSTSIGSVsgsssisnsSGPGD.DG..SHLWPQLPAWE.ILEAV.PfvVDAALTACSHGrLFPrELATGLKDLADFLPASTATIVSYFSA..EVT.RGVWKPAFM
 1096- 1195 (107.44/27.27)	SILAEDILSLLMLS.VKDIAETTVSRHGSDKLKRTKYAMGHGKIsLATAMTQVKV.....AASLGATLVWLSGGTtlVQSLFQEMLPSWFLSAqdlDRGGASGGTV.................................................................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.11|      15|      17|       7|      21|       2
---------------------------------------------------------------------------
    7-   21 (30.33/20.77)	PWVEWAGEYTKAAQA
   25-   39 (27.78/18.31)	PPNEWAARVATAAAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     267.74|      84|     102|     316|     402|       4
---------------------------------------------------------------------------
  316-  402 (135.94/95.11)	NGHCLGGSYSALW...TPIDmYLEDCLDGSIAATNSIEILsgLVKALQAVNRSSWHDAFMALWIASVRLVQREREPIE..GPVPHLETRLCM
  419-  507 (131.80/81.86)	DSRCGETDLSSHWkqkTATD.DLRKELMLSLQALGDYESL..LVPPPCIISAANQAASKAAMLVSGINSSSGYMESINetGNMRHLIVESCI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.70|      12|      24|     181|     192|       5
---------------------------------------------------------------------------
  181-  192 (20.63/13.50)	SLLELTPEK..KAQ
  206-  219 (17.07/ 9.90)	SFSEQKPEKieKLQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     215.81|      69|     896|      85|     159|       6
---------------------------------------------------------------------------
   85-  159 (101.57/86.08)	LASPAlLLTLLSSRVIPQrVARPTAyrLYLELLRRHGFKLCFQMKAA....NSNKIRQLIDDnlNLSQIFGFSA....CEPGV
  984- 1060 (114.24/73.87)	LAGPA.LENLAASCPWPS.MAIVAA..LWTQKVKRWSDFLVFSASRTvfhhNNDAVVQLLRS..CFTSILGMSStslcCCGGV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09638 with Med33 domain of Kingdom Viridiplantae
Unable to open file!