Description | Mediator of RNA polymerase II transcription subunit 26 |
Sequence | MQEDRQQEPYFLRAKLLEAVDAEYNVKDMSLILEVLGKLEVLPVTKEILESTRLGKTVNEFRRKVNDPLLAKRLKALVKKWRDAVLTDEPPRNHVTVNGTSSKVSERPGGNRHLPTLTSGYTSASSSPTLASSSRVSPAGSYNSNSLSPRIGTVTNHSNNTSVNSLAANRNGSSSIASRSPNHRNLQLPASSHVTLVSPSASTASPLLNSRHLVSPHKSRSPGGPSLSVFNSHTSNLSPLPSSHYQSSTTSSYAPNAETVSRTNAANKRYRELDDSPLSASTEPPAKKSRSGVNGTLDDPLLALDDISRDSYASRGSDHSDGFTSKDNRFSVSVPSPAALSQASVHSPSIPATGIDSNVPSPANLFDTETANISQINSQPKKKRRKKQTEDINDAIRAKIVQAQAEKAAKAARELEIQNKDKESVSVNPELVETRRRYIEGLAPEDKLANNVIVETYLKSQNELQVKMERDILARRDRAESDFKGADEGTLNQRGVSVDKSKGFSKKEKKKHKKKHDEATEDISNANPFPSEAEILSKLPPLDPEILKEFANYEYDVTLSPLQPDGDSNNTNNRETESTNNLKSLSTIEVKPPKKIDWGDSDDEDDTHGNDGKSDVVLSQQVPVALESSVDISGSQIIGSEDITDYNKVDLEPTPVREVNDADIESYIKDEVPNLNGNHDKDGQFREWHETLTVESYKSEPLHILPYTIIDF |
Length | 712 |
Position | Unknown |
Organism | Orchesella cincta (Springtail) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Collembola> Entomobryomorpha> Entomobryoidea> Orchesellidae> Orchesellinae> Orchesella. |
Aromaticity | 0.04 |
Grand average of hydropathy | -0.796 |
Instability index | 56.47 |
Isoelectric point | 5.88 |
Molecular weight | 78106.22 |
Publications | PubMed=27289101 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP09519 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 61.92| 22| 24| 121| 144| 1 --------------------------------------------------------------------------- 121- 143 (35.33/18.18) YTSASSSPTlASSSRVSPAGSYN 277- 298 (26.59/ 6.10) PLSASTEPP.AKKSRSGVNGTLD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 101.53| 22| 24| 299| 320| 2 --------------------------------------------------------------------------- 166- 184 (21.04/ 6.03) ...LAANR...NGSSSIA..SRSPNHR 224- 238 (22.40/ 6.82) GPSLSV..........FN..SHTSNLS 299- 320 (36.65/15.13) DPLLALDD...ISRDSYA..SRGSDHS 321- 347 (21.43/ 6.25) DGFTSKDNrfsVSVPSPAalSQASVHS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 225.55| 47| 210| 348| 394| 3 --------------------------------------------------------------------------- 348- 394 (79.58/43.78) PSIPATGIDSNVPSPANLFDT....................ETAN....ISQINSQPKKKR.....RKKQ...TEDIND 415- 483 (39.13/17.89) LEIQNKDKES.VSVNPELVETrrryieglapedklannvivETYL....KSQNELQVKMERdilarRDRA...ESDF.. 485- 525 (42.77/20.22) ......GADEGTLNQRGVSVD....................KSKG....FSK...KEKKKH.....KKKHdeaTEDISN 561- 606 (64.07/33.86) PLQP.DG.DSN...NTNNRET....................ESTNnlksLSTIEVKPPKKI.....DWGD...SDDEDD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 35.01| 10| 15| 196| 206| 4 --------------------------------------------------------------------------- 196- 206 (14.68/ 9.01) LVSPSASTaSP 213- 222 (20.33/ 8.81) LVSPHKSR.SP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 74.87| 17| 17| 49| 65| 5 --------------------------------------------------------------------------- 49- 65 (27.67/18.36) LESTRLGKTVNEFRRKV 69- 85 (24.87/15.76) LLAKRLKALVKKWRDAV 89- 104 (22.33/13.39) .EPPRNHVTVNGTSSKV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 89.42| 28| 29| 643| 671| 6 --------------------------------------------------------------------------- 643- 671 (42.96/31.56) ITDYNKVDLEPTPVREVNDA.DIESYiKDE 672- 700 (46.46/29.56) VPNLNGNHDKDGQFREWHETlTVESY.KSE --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EILKEFANYEYDVTL 2) VKPPKKI | 545 590 | 559 596 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab