<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09467
Description |
Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MTEQPPAKKIKISLEPFIDNHVADITNLGQEILKTEVSLPEKLMHSVDRIWFERGEWKDITETSLKKAIEEQQDKKQEDQDENKQDAPSLPNSMPSTAQPPPPPGFDIIKLRESVINKLFHAKSEIDVALDVINILAASNRASATTKDLVLPAGSLTATYVTKPKQTMKAQLESTQLNLGLKRTKQKQAADFLKNSAATLKGLVEKEQVFWNEALDLRRNNWQMFPSNQLGNVNTGSSFFVQYGFSEVGSDFNEASMGELKRGGDTTDNNALQLSLPHANSRQVVVSISQSQMGQLKIGRNRFSEGILGMIESDETEKKDTTCSPLFSNNTIHSEVQAQLGDAHATVFDAELFSDILAEAQALSSNVRFPDDEIVINIDGHIDLSIRKEPVENRLASFDSSVSPQSVIISRSINLAFRLLLLQHQRYNAWKQKAKYLSTNPKIHPMLAQHDASLLISSAAAQAAAQAAQISQTNANPSSQSMIANSPVNSATGSVTNGIQSPKVGQPSTTSNVNPAISTTTPNVVNATVGPSNTVGSGNVTGAVGSSTSVANVASAAMRAQTRSPNQITPRALPQHIPVLLPILSLTRFWVQFDRVRQVIHHLISPLCASIAIAAHFKCELMSMPSSSLPKKHLYDTYPGYTEVALSLGISLFKGPSLKFGLNQSGSISVCLPQTTVVLQNVSEFESFLSREIKVICLQTVCSIANDIMGRHADYMKAVGTTNKQRFLWQVDKVDEAIHGSVWSSQGADHVWRNITVSMKHLGTSYSVQFQLDRTHLLEEKTYTVELGKHASNELAMGFREKVFALVKLIIDDAIMTLS |
Length | 819 |
Position | Head |
Organism | Choanephora cucurbitarum |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina>
Mucoromycetes> Mucorales> Mucorineae> Choanephoraceae> Choanephoroideae>
Choanephora.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.252 |
Instability index | 43.58 |
Isoelectric point | 6.74 |
Molecular weight | 89685.70 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP09467
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 130.09| 34| 35| 456| 489| 1
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428- 461 (45.26/27.51) NAWKQKAKYLS....T..NPKIHPMLAqhDASLLISSAAA
462- 495 (53.55/33.97) QAAAQAAQISQ....TNANPSSQSMIA..NSPVNSATGSV
496- 526 (31.27/16.60) TNGIQSPKVGQpsttSNVNPAISTTTP..NV.VN......
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 371.11| 121| 432| 214| 344| 2
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214- 344 (185.43/182.62) ALDLrrnNWQMF..PSNQLGnVNTGSSFFVQYGFSEV....GSDFNEASMGELKR.GGDTTDNNALQLSLPHANSRQVV.VSISQSQMGQLkigrNRFSEGILGMIESDETEK...KDTTCSpLFSNNTIHSeVQAQLGDAH
645- 776 (185.68/146.62) ALSL...GISLFkgPSLKFG.LNQSGSISVCLPQTTVvlqnVSEFESFLSREIKViCLQTVCSIANDIMGRHADYMKAVgTTNKQRFLWQV....DKVDEAIHGSVWSSQGADhvwRNITVS.MKHLGTSYS.VQFQLDRTH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.82| 15| 31| 370| 387| 4
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370- 387 (18.46/19.08) PDDeiVInIDGHIDLSIR
404- 418 (26.36/14.14) PQS..VI.ISRSINLAFR
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