<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09423
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDQDAPDDFASDSFFDQNSLQQQIQQIDAGADLNDPDLNGTVPSVALPPNPAVVEQLARKWYSGCVERIAWSRHGHLASISEDGSTVYLECLRYDHGSNSWDLHERHSLTTVFEEAISLAWSATGGELAVVDIKGRVWIYHVALTAINRLNLARQGALDEGDDYSQPIGLTWLNQDRQERPRNVVTHASKGETRWEHANTRAKPLGTYWPRAALIVHRNGLTTLCFQRRDGQYLKVTKQLTPQDRVLYTHASFAPTIDGKMLIAVHSYEKVISAFFLAIDWTEVNQGLEGLPVMTIDPVSSKVSSHPSGSAAVPDTFDPGSWSLSHLKVVQTSDVEKAVQTPPTILAVLTGVNRTVSIPDAGFLVSSLIKRWAVNSVETKLHPLFDALPSTGAAAAVTKPLYILQEQPDKEEQVITTVHHIDGVQTLAITTQENRTDFLNLEDLSPMSYAASVQETSCMSQSGFTFPYTQTILDPSLSPGACVRADLAANGKTQLVVMEYHLEQRQTQQPLDPHVDAAIAALNLTFARACWSNATIDDILMCASRTIPPALIPTVISSVYRTLFRDGEFVHEKTPGSELERMFHKQVMAKVFSYHASLASTCSQLVSVASTEARTGGWTLSAQWAWIVNNVRQTTTLLFMNLRDIQNVTIVVGQDFTDMLCANLRWGLSLIRFIFNAILEVGDRESNPDMFDDKARGRLGDTHGDGSQGLVALLLNCHASRVFLIAFVRAVRTYAKITEPKSQHQLQVLQCIQQQTNGKGLSFGAIEALLEYRWSAAGDVEGNIAATAVRQLDMMATGIVHEAYQPTIKTLLSKLVNSPSGLRAKMLVDRLKLFVDHVDLEYIFLNQGILGHRRDGRSTEVIYDVLRKRPITKGTAEPHGASQPMVRKCTRCGSFSEDVVVPPKEWPRQIALSLARCVCDGNWVLEPWEQVCK |
Length | 933 |
Position | Tail |
Organism | Cladophialophora carrionii |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Chaetothyriomycetidae> Chaetothyriales> Herpotrichiellaceae>
Cladophialophora.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.158 |
Instability index | 36.02 |
Isoelectric point | 5.92 |
Molecular weight | 103297.12 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP09423
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 171.65| 57| 85| 346| 426| 1
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356- 426 (76.31/75.38) VSIPDAGFLVSSlikRWAVNSVETKLHplfdalPSTGAAAAVTKPLyilqeQPDKEEQVITTVHHIDGVQT
451- 507 (95.34/45.63) ASVQETSCMSQS...GFTFPYTQTILD......PSLSPGACVRADL.....AANGKTQLVVMEYHLEQRQT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 302.94| 96| 695| 55| 163| 2
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57- 155 (159.36/145.70) LARK.WYSGCVERIAW..SRHGHLASISEDGSTVYLECLR...YDH....GSNSWDLHERHSLTTVFEEAISLAwSATGGELAVVDIKGRV..WIYHVALTAInrLNLARQ
526- 633 (143.57/95.68) FARAcWSNATIDDILMcaSRTIPPALIPTVISSVYRTLFRdgeFVHektpGSELERMFHKQVMAKVFSYHASLA.STCSQLVSVASTEARTggWTLSAQWAWI..VNNVRQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 53.01| 15| 510| 295| 309| 7
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295- 309 (27.51/20.56) TIDPVSSKVSSHPSG
807- 821 (25.49/18.47) TIKTLLSKLVNSPSG
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