Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MASSSAGLEPGPSSSTDGANANLPIQASSSAAPSVIKGGNPQLSDEPWFAYPTPTPEQIEDELPPYFEGENIPLGLLLDRLVRKGYGDLRYLLAEVLPPLSAKHKPKHIINYATATRQALLKYLAVLRWKNAVDIPSTYHPSSSSSGTTGQQGNNNNNNSNNNNQNGTTNFPTPHSNGDDTSPPSILSNNKGKGKAYSAGGEGPGEEVTVKGKVSDSRRLAQFMEHQNKQHDDAVIHLKHVTKLVESLRERNPDLLTALSLLTTGTYQHLSTIITEPFIPKPPSTNSFILSLLKRLNRHIKYRLRCVDYLPPDLVVEGISDGQVYLRGGGKNGWKARMTIVGFGEDSKWWLTGVEWCWRDTRKGVYDPGGDSEEGGEGKKFVGEERQSILDLANLEILPPREVDIQRFYQQEEKGIEVEPQTVNIAAPDESTTTKSMDVELKDQKPKNTVVDAPLVRIYNFLQHLSLSYQLEILFSQAMTLSQGKWRNQLRVEIDRENKTLKVKYWVRPRPAVIPQQPQQAAVGKRPAPTANLNAARTPLVGGVLSITLGENGPRPTETDSILGDVSSGGLIPNERILRLQLGVKWEVGELGVGGGLKLGDVMDATALNVDPASLDMENLLMSSARAHAAHLTRVQASSLISSPKFILSLLNSPSLQESEDQTSSRPLTLRIPLPSRQRISSLLIGVSAYNGYIEIEDDGSIGDEARANRVELATKSINDGKTRLVDDIGRLTVAVVMENLEDQMRQSGWKPIRRLALRSQDLAKVQLHPATTILIPLPSTSSHYFVTKVTQGGLAFELLKTIKVPIENGLGVGTKAAVGDRIPLDLEKLKARRQDKDEMTASPFEIGNKDLRELYILSNALVAQTLIEQQLKERNIPFNAQYPPTSGPGAPRSSSALAGMVPTICVDVGDLLRDGKTGAAADVAMPKVGMQIEDWWKGGRCEVTTIVQLRQQSSMSQTSTPTTSQPHSEDISFDPASSIVKFRAKDIERCVPAFLEQWERLSKVIVVAGEVNRLNKLAEFRDIKMLSFDLRTATLSYSKGYNASITYIPTNDSYQVILSTDHTSTSPAFETDSPSPVQKERHNPHEKLSQLLSARLTELASQPLESRGSIGKEFFGLLKNTLPFFEQVDKLEKRNWNLLIMDLRNWRIVRDHESRRYALDIILIPSLTHYLIQSSSKPRGPDQRIVDITGKLNELPLTKIIPKVFDNFKEQQHTPSGGKREIPPLMKLDKNKSMLCKVDLIESVLEGFLNEVDLVIGVKKE |
Length | 1262 |
Position | Tail |
Organism | Kwoniella mangroviensis CBS 10435 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Tremellomycetes> Tremellales> Cryptococcaceae> Kwoniella. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.424 |
Instability index | 45.89 |
Isoelectric point | 7.34 |
Molecular weight | 139438.84 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP09405 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 771.29| 201| 218| 488| 703| 1 --------------------------------------------------------------------------- 488- 703 (302.69/226.59) NqlRVEID....RENKT............LKVKYWV...RPRPAVIPQ..QPQQAAVGKRPAPTANL...NAARTPLvGGVLSITLgengPRP.TETDSILGDVSSGGLIPNERILRL..QLGVKWE.VGELGVGGGL.....KLGDVMDATALnvdpaSLDMENL..........LMSSARAHAAHLTRVQASsliSSPKFILS.LLNSPSLQESEDQTSSRPLTLRIPL...PSRQRISSLLIGVSAYNGYIEIEDDGSIG 709- 911 (233.80/146.03) N..RVELAtksiNDGKT............RLVDDIG...RLTVAVVMEnlEDQMRQSGWKPIRRLALrsqDLAKVQL.HPATTILI....PLPsTSSHYFVTKVTQGGL.AFE.LLK...TIKVPIE.NG.LGVGTKA.....AVGDRI..........PLDLEKLkarrqdkdemTASPFEIGNKDLREL..........YILSnALVAQTLIEQQLKERNIPFNAQYPPtsgPGAPRSSSALAGMVP.TICVDVGD..... 914- 1112 (234.80/146.16) ............RDGKTgaaadvampkvgMQIEDWWkggRCEVTTIVQ..LRQQSSMSQTSTPTT.........................SQP.HSEDISFDPASSIVKFRAKDIERCvpAFLEQWErLSKVIVVAGEvnrlnKLAEFRDIKML.....SFDLRTA..........TLSYSKGYNASITYIPTN...DSYQVILS..TDHTSTSPAFETDSPSPVQKERHN...P.HEKLSQLLSARLTELASQPLESRGSIG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 49.55| 14| 174| 194| 207| 2 --------------------------------------------------------------------------- 194- 207 (27.61/16.41) GKAYSAGGEGP...GEE 369- 385 (21.93/11.39) GGDSEEGGEGKkfvGEE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 60.33| 18| 1039| 173| 191| 6 --------------------------------------------------------------------------- 173- 191 (30.05/21.43) TPhSNGDDTSPPSI.LSNNK 1215- 1233 (30.27/16.12) TP.SGGKREIPPLMkLDKNK --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) DEPWFAYPTP 2) IEDELP | 45 59 | 54 64 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab