<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09367

Description Uncharacterized protein
SequenceMSSPQPNPTTTTSDSISTSHNDQANVDGSNGLKDEEVTTVIVKKEEPDLSLPPPVPPQGRKATTPAPVPSIGQSTIPTIPANETEPPLGQVNAEAGPGPSTEESRSRSLWEKQVGEKKRKWGMIGYEEDEIELLEEDCTSLHLALLLDQTSTLYPLSPTRFRSYEEVVDRLLPYHVWQIHDEELNGRIPPSKEREMREVEEARKLVDRIRGVKERFGKVRRRADENANIPPIISFHQTINQSLKEEISSLQTILRPLNAEYAVYEKQQEDKRRAEEEKKRKEEERLRAIEDERQRRVVAQRKAEEEAVRKREEEIRRKREEEEERRRRAVAAQQASSNVPVQTNTPFSHNGSAGQAPVTPRLNQPVIPNPSNLPTVTTQTTTATSTPMINPVHPTAIGPDTPSTPSVYADRGKPRGRPRGRGRASTREPSVSHLSGHTNGTTNTPSPNSASTSLPGATGTTQPTTPGTPGSSAPAAGTAAGVGGPNKGPVALTVNRSLIPQLLSLGLLIANPSATSPKPPATIIKHLEDKNSVVLSVNLTQCTKTQLIALAKLLNVNTRAPATPGAPVQAPNTPGATTSAPANGSASGAVNGGGVTSVQGNTAPTPAQGQAQVKAQASVSTSGPVPGNGSGILNAAGKSENGELSKSG
Length648
PositionTail
OrganismKwoniella bestiolae CBS 10118
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Tremellomycetes> Tremellales> Cryptococcaceae> Kwoniella.
Aromaticity0.02
Grand average of hydropathy-0.753
Instability index57.55
Isoelectric point8.80
Molecular weight69248.26
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09367
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     108.02|      29|      29|     271|     299|       1
---------------------------------------------------------------------------
  198-  219 (20.64/ 8.59)	.....EVE..EARKLV.DRIRGVK.ERFGKV.
  270-  298 (49.58/30.02)	DKRRAEEE..KKRKEE.ERLRAIEDERQRRVV
  299-  330 (37.79/21.29)	AQRKAEEEavRKREEEiRRKREEEEERRRRAV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     254.33|      34|      42|     561|     594|       2
---------------------------------------------------------------------------
   47-   98 (37.62/12.46)	PDLSLPP.PVP........PQGRK.ATTPAPVPSigqstiptipaneTEPplGQVNaeaGP...G
  399-  441 (38.82/13.09)	PDTPSTPsVYAdrgkprgrPRGRGrASTREPSVS.............HLS..GHTN...G....T
  442-  459 (26.13/ 6.44)	TNTPSPN.SAS........TSLPG.AT.....................................G
  463-  488 (37.63/12.46)	PTTPG................TPG.S..SAPAAG.............TAA..GV.....GGpnkG
  561-  594 (68.57/28.68)	PATPGAP.VQA........PNTPG.ATTSAPANG.............SAS..GAVN...GG...G
  606-  637 (45.55/16.62)	PAQGQAQ.VKA........Q..AS.VSTSGPVPG.............NGS..GILN...AA...G
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.39|      24|      31|     337|     360|       3
---------------------------------------------------------------------------
  337-  360 (43.56/25.25)	SNVPVQTNTPFSHNGSAGQAPVTP
  371-  394 (42.83/24.68)	SNLPTVTTQTTTATSTPMINPVHP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      29.15|       8|      42|     181|     190|       4
---------------------------------------------------------------------------
  181-  190 (12.73/10.83)	DEelNGRIPP
  224-  231 (16.42/ 7.24)	DE..NANIPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.06|      20|      42|     490|     509|       6
---------------------------------------------------------------------------
  490-  509 (31.77/23.38)	VALTVN..RSLIPQLLSLGLLI
  533-  554 (27.30/19.08)	VVLSVNltQCTKTQLIALAKLL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09367 with Med2 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MSSPQPNPTTTTSDSISTSHNDQANVDGSNGLKDEEVTTVIVKKEEPDLSLPPPVPPQGRKATTPAPVPSIGQSTIPTIPANETEPPLGQVNAEAGPGPSTEESRSRSLWEK
2) TRAPATPGAPVQAPNTPGATTSAPANGSASGAVNGGGVTSVQGNTAPTPAQGQAQVKAQASVSTSGPVPGNGSGILNAAGKSENGELSKSG
3) YEKQQEDKRRAEEEKKRKEEERLRAIEDERQRRVVAQRKAEEEAVRKREEEIRRKREEEEERRRRAVAAQQASSNVPVQTNTPFSHNGSAGQAPVTPRLNQPVIPNPSNLPTVTTQTTTATSTPMINPVHPTAIGPDTPSTPSVYADRGKPRGRPRGRGRASTREPSVSHLSGHTNGTTNTPSPNSASTSLPGATGTTQPTTPGTPGSSAPAAGTAAGVGGPNKGPVALTVNR
1
558
264
112
648
496










Molecular Recognition Features






MoRF SequenceStartStop




1) ILNAA
2) LKDEEVTTVIVKKEEPDLSL
632
32
636
51