<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09301
Description |
Uncharacterized protein |
Sequence | MAPDRIDQNVYEGKHSSPDSDFGSQSLKDIIQDLYELMVQTTSYGNVGQGVSSKDVLQNTVAHLHSSLTQLHASASSPSATSIRVPPELIQYVDAGRNPDIYTREFVELARRGNQLMKGKKQAFGSFRDILAREMASALPEVKGDVENVVENAIQIAWDPTSSQALKGQAFEFLNQLREDVSGWQICLTLFTRTPQTSEVVRLVSIEIVNNAVAHQHLDEASLTFLKNSLLEYARRVYGGGQEQVDSPSLQNKLTQTLTSVFAFSYQRGWESFFADFLSMTCLPNSTSCDNLAGTALYLRILGSVHDEIADVFLSRTGEDQKRNNDLKDLLRERDVPKIATSWQEILTYWQGKNDTLVEMCLKVIGRWVNWIDISLVVNQNFLTILLQLIGRVAPNNGEDKVRDAAIGCLTETVGKKMKAGDKMDMIEFLNLGDIVSQLVASPALANRFGSDYDVDFAEAVAKLVNGAVFDIVKALEESADGSPTRIKADQQLLIFLPHLLRFFSDEYDEPCSTVIPSLTDLLTLFRRAQPLPAQYSSMLSPILNAIITKMRYDDTASWDDQITETDGAEFMELRKRLEVLQKIVAAVDQTLYIDVLSNVVGNTFQSIEQRGSGINWRDIDLALHEMYLFGELAVPNSGLYAKSQPSSVASERLIAMMKKMIESGKCIASYNHPAIQLQYMEICVRYCSFFENQSAFIPQVLEHFVALVHHNHVRVRTRSWYLFGRFVKHLRAILGNVAETVITSISDLLVIKAEVPKPDDEDDMSSDESDHSAGAVFTSQLYLFEAVGTIASTSTTPVNKKVQYARMVLEPLFASMEQALPAAGAGNAQANLQIHHIIMALGTLAHGFSDWTPGISSAGSKAPADEISQEFNRAAEAILVALESLKSPPEIRTAARAAFTRLVGTVGARLLPQLPRWISGLLSTESSKDEMAMFLRVLDQVVFGFKTEIIGVLDSLLSPLLMRIFTSLGEPVSGTDDEIQLGELRREYLTFLQVILNNDLASVLVSETNQGLFDVLLVSVETLAKNVNHGTGHLAASRMAFSILAKMAQLWGGPDVATPSHYPETATPAPTPAFPGFEQFLINRFNPVCWEVLRNPDFRPYQDAQAKSVLTEIAGLQQVIYSKTGMLFIEHLQQSFFPSMGFDGSDIIRSMTTSNDRKVFANFLVAYLKQRA |
Length | 1173 |
Position | Middle |
Organism | Pseudogymnoascus sp. 23342-1-I1 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes>
Leotiomycetes incertae sedis> Pseudeurotiaceae> Pseudogymnoascus>
unclassified Pseudogymnoascus.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.059 |
Instability index | 42.03 |
Isoelectric point | 5.16 |
Molecular weight | 130077.67 |
Publications | PubMed=29295979
|
Function
Annotated function |
tRNA nucleus export receptor which facilitates tRNA
translocation across the nuclear pore complex.
tRNA nucleus export receptor which facilitates tRNA
translocation across the nuclear pore complex. Involved in pre-tRNA
splicing, probably by affecting the interaction of pre-tRNA with
splicing endonuclease.
ECO:0000256 RuleBase:RU366037
ECO:0000256 ARBA:ARBA00004073
|
GO - Cellular Component | cytoplasm GO:0005737 IEA:UniProtKB-SubCell
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | small GTPase binding GO:0031267 IEA:InterPro
transcription coregulator activity GO:0003712 IEA:InterPro
tRNA binding GO:0000049 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
tRNA processing GO:0008033 IEA:UniProtKB-KW
tRNA re-export from nucleus GO:0071528 IEA:UniProtKB-UniRule
|
Interaction
Repeat regions
Repeats |
>MDP09301
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 168.53| 45| 169| 307| 351| 1
---------------------------------------------------------------------------
173- 191 (21.42/10.82) ...................FLNQL.R....E.DV......SGWQICLTLF.
307- 351 (79.84/64.95) DEIADVFLSRTGEDQKRNNDLKDLLR....ERDVP..KIATSWQEILTYWQ
477- 527 (67.27/53.30) EESADGSPTRIKADQQLLIFLPHLLRffsdEYDEPcsTVIPSLTDLLTLFR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 250.88| 55| 175| 939| 993| 3
---------------------------------------------------------------------------
538- 579 (27.56/14.28) ..................SMLSPILNAIITKMrYDDTASWD.DQItetdgaEFMELRKR.LE..
581- 629 (55.07/37.01) LQKIVAAVDQTLyIDVLSNVVG....NTFQSI.EQRGSGINwRDI......DLA.LHEMYL...
939- 993 (90.28/66.10) LDQVVFGFKTEI.IGVLDSLLSPLLMRIFTSL.GEPVSGTD.DEI......QLGELRREYLTFL
1117- 1165 (77.96/55.92) LQQVIYS.KT....GML..FIEHLQQSFFPSM.GFDGSDII.RSM......TTSNDRKVFANFL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 81.36| 25| 154| 40| 65| 4
---------------------------------------------------------------------------
40- 65 (39.18/30.94) QTTSYGNVGQGVsSKDVLQNTVAHLH
193- 217 (42.19/28.38) RTPQTSEVVRLV.SIEIVNNAVAHQH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 84.75| 21| 169| 874| 894| 6
---------------------------------------------------------------------------
874- 894 (32.30/18.29) RAAEAILVALESLKSPPEIRT
1017- 1032 (17.06/ 6.48) .....LLVSVETLAKNVNHGT
1039- 1059 (35.40/20.69) RMAFSILAKMAQLWGGPDVAT
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