<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09289
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDDDMEVDIDDLFGDGAGGLLPPSRPPPKGLFQRVDELRGSGCCQSIAWSRWGSIASITSNGLDLEFRNLRIHPKDGSWDLSDPTIIPQIAPTVDGGQLKHLCWSPNGADLAAIDSAGRIAILNLAQSLNKPTFTRNSNVDPIEDLRAVVGAYWLNLSPSNLRQPGIQSVAVKTSTDYRYEISQAIAFGPCFPNAHKSALITVSTGGTLSLLWPQADGKWHELSSDIESISSSDDLITHASICADKNNTLLLAFATTAKKLSIARIAIKWGSPTANPPDRPVNPALNTVTPTIIIRLLSDTNWMDGSASDASDPFHLSPSMAALSHLSILSPSPDGPGGRPTSPTVITIRSHLPNSLSQYNQDTHSLINRWELSEASPSVHPAFEQLSARRNSVGSKPGPSPSLKKQEGFTSNKVVIWIEAICFERIICFGYSDGSVEYRDRTSLAELFTQGGLDKFSHISQIGFTYNGYEPSLVGALSPTHLSVVQKGCDGKIKWNPLVYNMGDIGTSLEDTQYAAVIAGFNMACSTAIMNSSNHDDLMAAASKFKHLPSFAFDLVSEVSKTLKFNVDYSEESHHDSLIRNPSIQLSLSIQNALGYNGDAHKRTFESKIAWISLQLRNCVVLITMAMNIRVPIPDQQKKVLGLEDSEVIRLLAGSVRWCLDLMSWLIDCLLHPEDPEVFESVTKGEDGSIPLLSGHLLATNNIALHVLLSSATRGFLTGICRRLAHLDYTARKAMSAAQSVSAPPGQSAPLISNSLRSSYTAIATLTSSSIVPISRFEAFVARIADVVKEAYTTAKFPSQQQAQGAPGDSKRNAVEQGILFGGALPEVMAPAISRIFSEELPKLRAEIDPSRLFFHDFGILGLPESNASAGKGATEGSATTSSALYRVNHTIDIFSRVPIQLGMEPEEAQGLDARGSRPGRRWRRCVRCAAAMEDIHSLTPPVQFLIMQQRRCYCGGNWDILAGARVVA |
Length | 970 |
Position | Tail |
Organism | Pseudogymnoascus sp. WSF 3629 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes>
Leotiomycetes incertae sedis> Pseudeurotiaceae> Pseudogymnoascus>
unclassified Pseudogymnoascus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.127 |
Instability index | 47.73 |
Isoelectric point | 6.08 |
Molecular weight | 105087.96 |
Publications | PubMed=29295979
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP09289
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 62.52| 20| 84| 199| 224| 1
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199- 218 (34.67/13.58) ALITVSTG..GTLSLLWPQADG
315- 336 (27.85/12.42) FHLSPSMAalSHLSILSPSPDG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 136.71| 41| 316| 22| 89| 7
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33- 85 (67.24/73.52) QRVDelrgSGCCQSIAWSRWGS.IASITSNGldlefrnlRIHPKDGSWDLSDPT
92- 133 (69.47/26.48) PTVD....GGQLKHLCWSPNGAdLAAIDSAG........RIAILNLAQSLNKPT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 41.08| 12| 265| 631| 648| 16
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631- 648 (16.89/25.16) RVPIPdqqkkvLGLEDSE
898- 909 (24.19/15.92) RVPIQ......LGMEPEE
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