<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09262
Description |
Mediator of RNA polymerase II transcription subunit 5 |
Sequence | MENPTAAGDAMRAAIEYWCQFVARCVSERLETDKFEAYVKIVHDQHPLPPTLVADFFLRPQPSDDSSLDPRIPPYLQVLTKLGYVDTPSILRALYKYSSSHAHAQAQKEHLQSNTEEGKGKEKEKQKENRDGKEKVEEKDDAQPKNITRWKSSYWAEEVLFYRLTKSVVEGRAIQDSRTALEVAMIISKFMELFTTALPATAFAADMLEQQFPTGQLRDEMESSRAALVALLLRLCENNILVSAIGKPFAKNARKALSTSLASFLPALQLVPEIADKLELFRTEILASSDPADKKKQVANAAMDELLDSTVGLENFVVAPISVSNTRAGLYIYLNAALIGRPILDDHALFSYMSNKYGADIQSSAIDLILASFDILANAVFRNEGQKDAHLLRSFLINKLPLLLYQLLPPGFSGTSAEFCITEALTHVDTSLFPTASLMFDESRNNNPYTESIREEFCAACVLHGLVQREHVERILGEISLSYEPSLQKHSKDKLVQDCLSDTDKIQGLVRELDKTDGNVGAVCQALVEVLRQSCHNKETMSLKLLCSQLAAKPQSLDVILLFEKLPNIIEPLCQLLDNWRYEEDQGEYQPVYEEFGAVLLLVFAFTYRYNLNAVDIGIATPDSWVAKIIGRGHIGRQGDELTQRENDHINGWVHGLFDTEAGGLGDELMSSCPPQEFYLIVAPLFQSIVVAYTYGYLNDESLKGGIEYLVDTFLLPSLVPAIRFLSDYLWIDQKEQKSIIKILQLILLPSSISGEASTMLSSVKNLIAKPLEHALRTYQRRDPKNQDIEPLLRTLKESVTLSRRTGGTDLNELESWTATPPSGLPSAVKLTIQGLVHWSIHPAMNSMPTSYTHRQILAGLKILGPRRLLHVILEEVRQHTAAGSANIIYDVATSLICAPDAVKDAPVTGMLDANGNMLPPIQRQRTLRDILKVEVQGCRKLQKEDPVLAEHMVRLHRRVETQMIIPQPQEMLQPADMSLNLADDTAALGDAMAAAASGVQGDNMSVDNLALDVSMGGVSSDMGLGSATDGGNLDPSGDAAMFEGFDTQDMDNFNWNITDTF |
Length | 1062 |
Position | Tail |
Organism | Fusarium poae |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Nectriaceae> Fusarium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.165 |
Instability index | 44.54 |
Isoelectric point | 5.05 |
Molecular weight | 117797.06 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364142
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP09262
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.06| 29| 47| 499| 527| 1
---------------------------------------------------------------------------
499- 527 (49.14/28.85) CLS.DTDKIQGLVREL.............DKTDGNVGAVCQAL
535- 577 (37.93/20.73) CHNkETMSLKLLCSQLaakpqsldvillfEKLPNIIEPLCQLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 82.61| 28| 146| 746| 783| 2
---------------------------------------------------------------------------
407- 454 (39.88/21.27) LLPPGFSGTsaefcitealthvdtslfptASLMFDESRN..NNPYTESIR
748- 777 (42.73/44.25) LLPSSISGE....................ASTMLSSVKNliAKPLEHALR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 145.29| 47| 84| 180| 228| 7
---------------------------------------------------------------------------
180- 228 (69.90/64.20) ALEVAMIISKFMELFTTALPATAFAADMlEQQFPTGQLrDEMESSRAAL
267- 313 (75.39/58.25) ALQLVPEIADKLELFRTEILASSDPADK.KKQVANAAM.DELLDSTVGL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.96| 17| 23| 921| 937| 10
---------------------------------------------------------------------------
921- 937 (27.83/17.64) PIQRQRTLRDILKVEVQ
947- 963 (29.13/18.78) PVLAEHMVRLHRRVETQ
---------------------------------------------------------------------------
|