<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09234

Description Uncharacterized protein
SequenceMSRRQGASSSSYSVSSFMSDELDYSDSLSLHEDSSTEHSGSRSELLSSLSVDLKMPPTEHVQSPAPHRDLEDMDFDADLQDRLQKAFDEIVKLKKENLEESCQRQQVEKELLVVRKKAKKLQDHLLKELQHSKGFEEARAADQRLIQKLKKDIELLKIQRDEYLEKFHQASDQILLQPLGAAKEAHEQDKHEIETLREGISQLKIHRDEYLAKFQEKNKPKLAPVQDIAVRYSEGHTQFTLDQLKLATENFSELLKIGEGGYGRVYKGTICDTAVAIKILRHNENLQGLLQFQREVLILTKVRHPHLVNLLGACDEVSALVYDYLPNGSLEDRLSCKGNTPALTWQVRTRIIGEICSALIFLHSHKPKPIVHGDLKPSNILLDADLVSKLGDFGIARFLVPSDTSTMVHLTDHPIGTMFYSDPEYMAHGELTQGSDVYSFGIIILRLLTGRHPREIVKRVEDAMINDELHTIIDRSAGEWPFVQVQQLARIAMRCAAEKRRRRADLVTDVWPVVETMMKNASLSACPSTSSSIQDESSVPHYFLCPILQKVMKNPHIAADGFTYEAEAIEEWLEAHDTSPMTNLPLRNCVTIPNSALRLVIQEHLQRGP
Length609
PositionTail
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Sorghinae> Sorghum.
Aromaticity0.06
Grand average of hydropathy-0.422
Instability index47.94
Isoelectric point5.92
Molecular weight69004.85
Publications
PubMed=19189423
PubMed=29161754

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09234
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     243.14|      45|      46|     123|     167|       1
---------------------------------------------------------------------------
   31-   73 (28.98/12.24)	.............HEDSSTEHSGSRSELLSSLSVD..LKMPpteHVQspaphRD..LEDM
   81-  121 (43.42/21.54)	DR.LQK.afdEIVKLKK.ENLEESCQR..QQVEK....ELL...VVR.....KKA..KKL
  123-  167 (75.63/42.27)	DH.LLK....ELQHSKGFEEARAADQRLIQKLKKD..IELL...KIQ.....RDEYLEKF
  172-  214 (58.76/31.41)	DQiLLQ....PLGAAK...EAHEQDKHEIETLREG..ISQL...KIH.....RDEYLAKF
  220-  262 (36.35/16.98)	PK.LAPvqdiAVRYSEGHTQ.FTLDQ.L..KLATEnfSELL...KIG.....EGGY....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     124.22|      40|      46|     357|     399|       2
---------------------------------------------------------------------------
  357-  399 (60.64/54.03)	SALIFLHSHKPKPIVHGDlkPsNILLDADLV..SKLGDFGIA..RFL
  405-  448 (63.58/44.92)	STMVHLTDHPIGTMFYSD..P.EYMAHGELTqgSDVYSFGIIilRLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     163.43|      50|      52|     504|     555|       3
---------------------------------------------------------------------------
  504-  555 (81.80/74.19)	ADLVTDVWPVVETMMKNASLSacPSTSSSIQDESSVPHYFLCPILQK.VMKNP
  559-  609 (81.63/65.45)	ADGFTYEAEAIEEWLEAHDTS..PMTNLPLRNCVTIPNSALRLVIQEhLQRGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.53|      32|      42|     271|     303|       4
---------------------------------------------------------------------------
  271-  303 (49.26/35.79)	CD..TAVAIKILrHNENLQGLLQFQREVLILT.KVR
  314-  348 (48.27/30.22)	CDevSALVYDYL.PNGSLEDRLSCKGNTPALTwQVR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09234 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) SDSLSLHEDSSTEHSGSRSELLSSLSVDLKMPPTEHVQSPAPHRDLEDMDF
25
75










Molecular Recognition Features






MoRF SequenceStartStop




1) YSVSSFMSDELDYSDSLSLHED
12
33