<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09208

Description Uncharacterized protein
SequenceMPTASGVPTTAAGGAVGGQAGSNSREKIWTGILEWIEKAKSDQPKIARHVPCYVTTNIKDGEPELKADSWPQKLIMQLMPKQLVGNIGGQYLKDSKTVIFHPSQCEALDALSKVMATGFQRPFLANPNPTQNPQQQQMPNQQQQQQSALITQLSTPPHSMASQGVGQMGNMAQQQAIRMQHPQQMQQQNQGPPVSQQMPQAIPTS
Length205
PositionUnknown
OrganismPhlebotomus papatasi (Sandfly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Psychodoidea> Psychodidae> Phlebotomus> Phlebotomus.
Aromaticity0.04
Grand average of hydropathy-0.661
Instability index51.99
Isoelectric point9.20
Molecular weight22316.14
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09208
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.00|      14|      42|     134|     152|       1
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  134-  149 (21.98/ 7.22)	QQQQMpnQQQQQQSAL
  181-  194 (29.02/11.54)	HPQQM..QQQNQGPPV
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.99|      25|      27|      43|      69|       2
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   38-   65 (36.69/25.73)	KAKS.dQPKIARHVPCYVTTNIkdGEPEL
   66-   92 (40.30/22.40)	KADSwpQKLIMQLMPKQLVGNI..GGQYL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09208 with Med25 domain of Kingdom Metazoa
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