<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09206

Description Uncharacterized protein
SequenceMSNQYPGGFGNQNRGNFGNQMVPMSMAGGVTQGGGANGTSNQMGNMMNYNQGMMHSPQQQQIPNTTAVGMGGVAASPSPMSMQAGPGMQSPSHVSQQQTGQQQQTSMQQQQVTSQQQQSQNSLTLHTSTNSTAASGGTTSSTMMNQGSAPGQGQFNIVSLCKFGQETVQDIVSRFQEVFQALRVSTPPNGTTAGSTEKKVQEQFRTIRLLFKRVRILYDKCNDSCQQGMEYTHVESLIPLKDEHDHKPQVTQSEEYQKALQDNRELLEQVMLKNKQLREVIDRIRIIIWEINTMLSMRKS
Length300
PositionHead
OrganismPhlebotomus papatasi (Sandfly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Psychodoidea> Psychodidae> Phlebotomus> Phlebotomus.
Aromaticity0.05
Grand average of hydropathy-0.735
Instability index49.97
Isoelectric point8.78
Molecular weight33073.73
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09206
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.14|      17|      17|      89|     105|       1
---------------------------------------------------------------------------
   89-  105 (30.84/12.72)	QSPSHVSQQQTGQQQQT
  108-  124 (27.30/10.41)	QQQQVTSQQQQSQNSLT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.99|      15|      24|       7|      21|       3
---------------------------------------------------------------------------
    7-   21 (30.39/15.50)	GGFGNQNRGNFGNQM
   33-   47 (29.60/14.92)	GGGANGTSNQMGNMM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.27|      12|      17|      56|      71|       4
---------------------------------------------------------------------------
   56-   71 (17.75/14.64)	SPQqqqiPNTTAVGMG
   76-   87 (24.51/10.53)	SPS....PMSMQAGPG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09206 with Med30 domain of Kingdom Metazoa
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