<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09201

Description Uncharacterized protein
SequenceGSEQGSWESALSYECRSLLFKALHNLIERSLLSRDVVRLGRWFVQPCSGADRTSGKSSHHLSFSFAFFVHGDSTVCASMDLREHPVVRRLTPEYLAEAQQTANGGGSGEVRPKPVILAPFGLSATLTGQFFRSGSMDPVTQKALDDWCAFYPLNTNGKDNSDLPPMVEVISGGIKLRYPSKYILVTDIDENTLSPGKVVPTCSQGGMTTNSINGEKSVLAIPQQDLMSPNQAEREGISHSLTDIPFNHNNDLGNPLSMHLAPSVATVLPERVWQDCLTNPLSQTANNGDLGATTTSTCSNVVPISSTSPSGSSSSSSSNSSSSSNGSTAATGNTAVTSSGIMIKQEPGEGSGVILSSNSGNCNSDAFTSAPSWNFTDPTQKATCTCFRCRKITGRSSATSCGGKTSGRTEKGTRIGRIPFHRRHHSLLLHGSSRSSSTTSLNSTAAVASSAHVVGVQDAPNSVTSTPTSQRAGNLPQNHPSYPRHSSLAESLAPIPSVGSPGSAGPSPHPNSTQSQPTSVPPADQLLSTISPHPPSSVNASAQPPTPIEAHLDKNTPAPTPTDQHDSKAVASPYQQQQPQAQQQQQQHQSVSDDMATSMSTSANAAATTLAGATHCHTTSSAATPKSGATTIQNEQQHVKKLDSMGSLKTANISVNNSMSVNSSGSNCNLSNNSGNSNVNSFVSSLKRPQLSSKDYENIIDDDYMPHQLLYDYSTWEAWLNHPVKRYKPNEESKLNQSYDLYAGRVHSQAHFAPASSLGSPATIEGHAMKNTVSGGKNIESTMCGPMDEEAEAPLLQAHEIKKEATDGGDGGKEGKCLTESLFTSEGLQASYKDLDQIFDSSDETSNDEAIPMNVHTPPGSNKSVSGMDEKRGMSSCNPNAGCIRPYGNEELSKMFPTPPSLEHHPNSSPCGGALSDVPMTDIHSPKLKLENYPNLGSPGDEPIEDWTYVFVPPNMCKFVGSSKYAPLTNLPSQSLLPISLPMTAVYKPSWLQQQQQQQQIATNNGCSSSSNSNSSSSGGATSGGNERVAASATAAHGGQIVPPPMSALNPSTIPTPPNPMSRPSPIGLMGGPPPGVMSTGGPPPPPPPAAMMTPNMMMPMGMNMMANGNFGQGPPMQGHPPGAILKPGMSPISPATGPFPAVGSPMHGLQHPFRRTPIPPPPPYELAIASPATSTSSYLNKQFNSEEPATPSMGGSRGTPEANALLVNVLLYDTLLNVFRDHNFDSCTICVCNAGKKCVGNIRGSDSGVYLALPGTTFASMTSALGNSGGGAGGGNMYGNGIDSPAAMMGGNIHQNGYFDEDPIKCQCGFSAVVNRRLAHRAGLFYEDEMEITNMAEDPSYHKKRSLLTIILGQSSNGESSIVATSANSGRCEGDGCEARK
Length1382
PositionMiddle
OrganismLutzomyia longipalpis (Sand fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Psychodoidea> Psychodidae> Lutzomyia> Lutzomyia.
Aromaticity0.05
Grand average of hydropathy-0.493
Instability index56.89
Isoelectric point6.08
Molecular weight145325.86
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09201
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     175.08|      31|      31|    1038|    1068|       1
---------------------------------------------------------------------------
 1038- 1068 (65.08/18.82)	GGQ.......IVPPP..MSALNPSTIPTPPNP..MSRPS...PIG
 1070- 1102 (42.46/ 9.96)	MGG.........PPPgvMSTGGP...PPPPPPaaMMTPNmmmPMG
 1125- 1148 (35.14/ 7.10)	..........ILKPG..MSPISPATGPFP......AVGS...PMH
 1149- 1181 (32.39/ 6.03)	GLQhpfrrtpIPPPP..PYEL...AIASPAT....STSS...YLN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     266.29|      47|      47|     423|     469|       2
---------------------------------------------------------------------------
  423-  469 (76.47/31.43)	R.......HHSLLLHGSSRSSSTTSLNSTA..........................AVASSAHVVGV.QDAPNS.....VTSTPTS
  471-  519 (64.79/25.40)	RagnlpqnHPSYPRH....SSLAESLAPIP..........................SVGSPGS.AGP.SPHPNS.....TQSQPTS
  522-  585 (35.87/10.47)	P.......ADQLLSTISPHPPS..SVNASAqpptpieahldkntpaptptdqhdskAVASPYQ.....QQQPQA.....QQQQ...
  588-  625 (46.13/15.76)	..............HQSVSDDMATSM.STS..........................ANAAATTLAGA.THC.HT.....TSSAATP
  637-  685 (43.03/14.16)	Q.......HVKKLDSMGSLKTANISVNNSM..........................SVNSSGSNCNLsNNSGNSnvnsfVSS....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     166.15|      30|      31|     886|     915|       3
---------------------------------------------------------------------------
  858-  883 (30.47/ 9.80)	P..PGsNKSVSGMDEKRG....MSSCNPN.AG.........C....
  886-  915 (57.04/25.87)	P..YG.NEELSKMFPTPP....SLEHHPN.SS........PCGGAL
  919-  943 (26.75/ 7.55)	P..MT.DIHSPKL.........KLENYPNlGS........PGDEP.
  945-  977 (25.43/ 6.76)	.......EDWTYVF.VPP....NMCKFVG.SSkyapltnlPSQSLL
  989- 1021 (26.46/ 7.38)	PswLQ.QQQQQQQIAT..nngcSSSSNSN.SS........SSGGA.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.10|      16|      22|     242|     257|       4
---------------------------------------------------------------------------
  242-  257 (31.84/19.04)	TDIPFNHNND.LGNPLS
  266-  282 (25.26/13.37)	TVLPERVWQDcLTNPLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.96|      23|      30|     151|     174|       5
---------------------------------------------------------------------------
  151-  174 (39.84/27.36)	YP....LNTNGKDNSdLPP..MVEVIS.GGI
  178-  207 (30.12/15.03)	YPskyiLVTDIDENT.LSPgkVVPTCSqGGM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.18|      21|      30|     764|     784|       7
---------------------------------------------------------------------------
  764-  784 (36.98/21.89)	IEGHAMK.NTVSGGKNIESTMC
  796-  817 (32.20/18.08)	LQAHEIKkEATDGGDGGKEGKC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.87|      13|      18|     306|     318|       8
---------------------------------------------------------------------------
  306-  318 (22.49/ 8.47)	STSPSGSSSSSSS
  327-  339 (19.38/ 6.07)	STAATGNTAVTSS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09201 with Med13 domain of Kingdom Metazoa
Unable to open file!