<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09193

Description Uncharacterized protein
SequenceMLKKVMRLDTNSNEDFKTLNPTFCKIKPETLSTWGESARNDTRLPNTDYTATIGGPRHNCSPFPISTHVNNRFILWDGDITLLEADTITNTTNETLSESNIISESILNVAGNELKDELSNNIRECRTGEVRVTKGYNLPAKYILHTVGPTFKEKFKTAAENTLHCCYRNVLCKAKELNLKTIAVCNVSTNQKSFPADLAAHIALRTIRRFLDKYTTQIVIFCVNSHERGIYEVLAPLYFPRDSLEERSALWQLPKDIGGEYGEPLHPDRQIRIIRNPQHSVLMRQGDDDSDNCPHDFESCVTDLEYGLSDLNNLNRSSYSGGGMHSHIQADLDRQHLLGDTSRNCAYERVVADGIEGLEHQESEKHVLAGLLVPDRQTVLDMRKTQTILEQIIAQAQHIFMRKRTQYVLDTLARDVKDSQIVSHWNDVSKPTMSCVKINIIMTPNMELRDLILCQKNSHQISCLINLARCMAWSVISYSNHLGLVKVEPLGNASSCLLASPNSDRMIEKKNKSMTMLEGMTSIDLGSTPIEETTQDITDAVPDELTESPEERYERLLYRAQIEDLNEVSGIGCLYQSGVDRLGRPVVVFCGKWFPANNINLEKALLYLIKLLDPIVKGDYVIAYFHTLTSANNYPSLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPAIKAKVHSLPGVEHLYSAITKDQLEIPAYITEYDMATNGLHYFTPVPQTTCS
Length732
PositionHead
OrganismGlossina morsitans morsitans (Savannah tsetse fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea> Glossinidae> Glossina.
Aromaticity0.08
Grand average of hydropathy-0.335
Instability index37.36
Isoelectric point6.14
Molecular weight83156.97
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09193
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.81|      28|      74|     478|     506|       2
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  478-  506 (45.07/32.38)	YSNHLGLVKVEPLGNAS..SCLLASpNSDRM
  553-  582 (44.74/26.85)	YERLLYRAQIEDLNEVSgiGCLYQS.GVDRL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     187.34|      57|     511|     136|     196|       3
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  136-  196 (94.43/65.68)	YN.LPAKY.....ILHTVGPTFKEKFKTAAENTlhccYRNVLCKAKELNLKTIA..VCNVSTNQKSFPA
  644-  708 (92.91/54.24)	YSvLPYKYkknlkAFYIVHPTFWTKMMTWWFTT....FMAPAIKAKVHSLPGVEhlYSAITKDQLEIPA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.72|      21|      39|     333|     353|       4
---------------------------------------------------------------------------
  333-  353 (36.54/29.65)	DRQHLLGDTSRNCAYERVVAD
  375-  395 (34.18/27.20)	DRQTVLDMRKTQTILEQIIAQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09193 with Med17 domain of Kingdom Metazoa
Unable to open file!