<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09189

Description Uncharacterized protein
SequenceMNFSFESTALRLINGLGSAEIQPQFSRHFSEKPASSVASSECEELNRVLILTLARSMHIICSGDEMQPWCKELLSTIMQNTPHSWASHSLACFPTVLSEFFSQNNHPIENKQLLKKSVEEEYRNWTSMTNENDIINHFIKPNTSPLFLCLLYKMIWETENISPVAYKILEGISARALSANLRKLCDYLVNEVASSNGKEFIHKCVDSINNMIWKYNVVTIDRVVLCLALRTQEGNEAQVCFLIIQLLLLKASELRNRVTEFCKENNPDHWKQNNWHEKHLSFHQKYSEKFAPDESASHPPLPVYFSNVCLRFLPVLDVVIHRFIELPIQHVHQILEVILDHLSILYKFHDRPITYLYNTLHFYERILRDRPSLKKKLVSAITGAFCDIRPPNWCVSDQYKMFLQSADILWNPELTYYINIIRRLAETVSGKNVFYNTDWRFNEFPNATAHAMYVTCAELLSLPLAPTIVANNVIDVVLKGYALIPPREIHNYINAMGIVLAELPETYWSVVYERLQEVLNLPKMLRWTYRFNVFELLNFKTVRQAMIDKTYAAILAVTHSVFHHMGCFKLATITKYIKEKLKPCVHTESQLVFLCHVFGPFLQRIEQEKPNAVAGIAILLYEMLEVVDKHHGPTPLEYMDPICDLLYHIKYIYVGNIIKNESEAIIKRLRPVLQKRLRFVTHLNIEDKHNEKPNEIQHTPATNVNNNTSCSQFPVTQSFSNINAQQPQQQPQLQQLQHQQQSQIHVQNLSQTVQQPQPSPISQMGGLVGQTAQQQQQQQQLTQQQQHQLQQMQLQQQQIQQMQQQQYQLQQQQMQQHLQQQQHLQQQQTQNANMGPMRHN
Length840
PositionTail
OrganismGlossina morsitans morsitans (Savannah tsetse fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea> Glossinidae> Glossina.
Aromaticity0.09
Grand average of hydropathy-0.333
Instability index55.42
Isoelectric point7.41
Molecular weight97757.19
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09189
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     120.57|      26|      27|     773|     798|       1
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  725-  739 (24.65/ 6.07)	QQ.PQQQPQL.QQL..QHQ...........
  773-  798 (56.45/21.38)	QQ.QQQQQQLTQQQ..QHQLQQMQ.LQQQQ
  800-  828 (39.47/13.20)	QQmQQQQYQLQQQQmqQH.LQQQQhLQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      90.66|      19|      56|     443|     463|       2
---------------------------------------------------------------------------
  391-  412 (26.93/11.34)	PNwcvSDQYKMFLQSADILWNP
  445-  463 (33.30/23.52)	PN...ATAHAMYVTCAELLSLP
  504-  522 (30.42/14.29)	PE...TYWSVVYERLQEVLNLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     111.76|      32|      74|     567|     604|       4
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  567-  595 (45.66/25.27)	........CFK...LATITKY......IKE.......KLK..PCVHTESQLVFLC
  599-  639 (30.31/25.41)	GPFlqrieQEKpnaVAGIAIL......LYE.......MLEvvDKHHGPTPLEYM.
  640-  681 (35.80/15.79)	DPI.....CDL...LYHI.KYiyvgniIKNeseaiikRLR..PVL..QKRLRFVT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     113.33|      38|      54|     149|     189|       5
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  149-  189 (51.33/49.64)	CL..LYKMIWETeNISPVAyKILEGISARALSANLRKLCdYLV
  204-  243 (62.00/42.61)	CVdsINNMIWKY.NVVTID.RVVLCLALRTQEGNEAQVC.FLI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.54|      20|      48|      20|      39|       7
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   20-   39 (35.34/20.71)	EIQPQFSRHFS...EKPASSVAS
   65-   87 (35.20/20.60)	EMQPWCKELLStimQNTPHSWAS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09189 with Med23 domain of Kingdom Metazoa
Unable to open file!