<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09182

Description Uncharacterized protein
SequenceMRVPPPILPNSPSNTSDIFQLGSRLKCSKEKSTKDALFINRTPPAFIRVPSKRQPRRIIDDFLRDSKTAEHYASSTLLTKNSSYESPYRSTYSIPTSLGINPYHQQTQHAVPHSQSNYNNNGGNNSVAQTPDSPRSTRSAPWPRSQQRSLFGNKPSSPRSVRSASTAGGGGGGGGGGGGGGGGGSGSGSGNNNGHPHNHHHHHQHSHHHHNQRQHQSSQRDHASSASSHQQRYRSSSVESHSSNDSRSTRRHKHRHRRTSDNDSELSRGSGRSARSHHRKHRRSRHRRDSGGSDRDSTRGRSYSGHRTSIARSASAIGSASELIDSSTQWREAQRRQVEASLGQSSVQQASVSKSSMVARSLHSNDSHSDTHSHHKSRRHRKNKSPSDSRNRLWNSELAKHLQFDLVDTTGMTEDQLREIPYTVVETNSKRSSSNIRIHKSNSKNSVGGKSTGSGNTLTNGSGSISGHGKNRVDRIRGLYYQNSNPHDSSSAKNGSIRSASTVSSRECDRNTGLVRMMSSMSMGDFISPTGSNLSPMENSALRVSHEHTDSGLGADQDYAYSSERSSDSTRYGTNKSSGASSGSHRKSNGPVLNGVNSSTYNSLMQQTVSNQKHYQHQQQQQQQQQQHQQQHAQSQRQNSFYAQRRHDNSQSKPNYSKYSTNQITTTTIPSNTASTSLHHHQLPNHSSISSSSAVSSNHSVTNYIAEHKRCLISVNINKRHLQQHQQQQQQKQQQQQQQSHQHQQKHLDMANETSSKSKTPNHRLLNYTTFENNQYKFSLNNVFGSKSGGGAATTAVTRSNSSSISSNNGGGNGDGKSFTNTQIDHFVEWPNTPAAPYYYQGPSSVALHAKRRDAKSDLGIPTRRLSGQSITKTQLLSGGHLTHLNMTGYPIMGPHYPAPGGYNARLHPAKSELFLAYPTTNEYEPPFIYNYKMPQMPEFSRSSQQQQQQQQQQQLQSTTAYHISGSQTADPSPTNLYKSAGNSSSGGSLYGGTAPANDVMYYQFDNGKTMPPIVQQPKSLHNKTLATVNAATTTTKTTSSSLSPSPSHVIGPLIYLQHNNNSNVAVTDANASAIATATATTINNQPTT
Length1089
PositionTail
OrganismGlossina morsitans morsitans (Savannah tsetse fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea> Glossinidae> Glossina.
Aromaticity0.05
Grand average of hydropathy-1.140
Instability index67.67
Isoelectric point10.24
Molecular weight119398.88
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09182
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             9|     891.22|     106|     106|     563|     668|       1
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   70-  149 (70.25/14.13)	.EHYAS.S...TLL...TKN................SSYES..PYRST..........YSiPTSLGIN........................PY.............................HQQTQHAVPHS....QSN................YNNnggnNSVAQTpdspRS.TR.S..APWPRSQ............QRS........
  154-  250 (117.48/28.27)	.KPSSPrS...VRSA..STA................GGGGGGGGGGGG..........GG.G..GGSGSG......................SGNN......NGHPHN.HHH.......HHQHSHHHHNQRQHQ....SSQ................RDH....ASSASS....HQ.QR.Y..RSSSVES............H.SSNDSRSTR
  256-  353 (63.01/11.96)	HRRTSD.NdseLSRG..SGR................SARSHHRKHRRS..........RH.RRDSG..GS......................DRDSTRGRSYSG........................HRTSIA....RSAsaigsaselidsstqwRE........AQR....RQvEA.SlgQS...................SVQQASVS.
  359-  459 (100.81/23.28)	.ARSLH.S...NDSH..SDT................HSHHKSRRHRKN..........KS.P......SD......................SRNRLWNSELA..KHL.QFDlvdttgmTEDQLREIPYTVVET....NSK................RSS....S..NIR....IH..K.S..NSKNSVG............GKSTGSGNTLT
  462-  561 (53.00/ 8.96)	SGSISG.......HG..KNRvdrirglyyqnsnphdSSSAKNGSIRSAstvssrecdrNT.GLVRMMSSM......................SMGDFISPTGSNLSPM.EN.........SALRVSHEHTDSGL....GAD................QDY....AY...............................................
  563-  668 (180.12/47.03)	SERSSD.S...TRYG..TNK................SSGASSGSHRKS..........NG.PVLNGVNSS......................TYNSLMQQTVSNQKHY.QHQ.......QQQQQQQQQHQQQHA....QSQ................RQN....SFYAQR....RH.DN.S..QSKPNYS............KYSTNQITTTT
  671-  787 (121.71/29.54)	SNTAST.S...LHHHqlPNH................SS.ISSSSAVSS..........NH.SVTNYI.AE......................HKRCLISVNI.NKRHLqQHQ.......QQQQQKQQQQQQQSH....QHQ................QKH....LDMANE....TS.SK.S..KT.PNHRllnyttfennqyKFSLNNVFGSK
  788-  875 (106.73/25.05)	SGGGAA.T...TAVT..RSN................SSSISS..N.............NG.G.GNGDGKS......................FTNTQID.......HF.............VEWPNTPAAPYYY....QGP................SSV....ALHAKR....RD.AK.S..DLGIPTR............RLSGQSITKTQ
  881-  985 (78.11/16.48)	HLTHLN.M...TGYP..I.......................MGPHYPA..........PG.....GYNARlhpakselflaypttneyeppfIYNYKMPQMPEFSRSS.Q.Q.......QQQQQQQQQLQSTTAyhisGSQ................T.........ADP....SP.TNlY..KSAGNSS.......................
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09182 with Med15 domain of Kingdom Metazoa
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