<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09156

Description Uncharacterized protein
SequenceGQLEAHDIPYYRRKQLKALHHYDEEIIREYFPLPKVLTGMLELCERMFQIRIVERPGVDTWHEDVRYFDVLDEEQPVAGFYLDLYTREDVKMQMKDNFGWTVGIRNRSSVTKTNPLSALIFNFPSPIYGKPSLLSFDDVVMLFQRFGYALQHLLTKVNYSEVAGVSNIEWDAVEVASHVMAHFLYNPTTLKEISSHYATEDPLTDAMVKSIQASRTHLAGYDLCQELYFSALDMELHARKDFWVDVMRELWPRYMTLPLEKKDAHPCSFTPIFSGDWAAAYFSHVWSQVIAADVYSAFHEASNNPEALAAVGRRFRDTFLAMGGACAPAEVFRRFRGRDPSPKALISVLGLKKFKGGGEESGKNRKMDCKNPLENLETNLEMFIENVRQIRIIVSDFQAQGQNVLNQKIQGLVTGLQEIDKLKSQVQNVHVPFEVFDYIDQGKNPQLYTKDCIDKARNKNEEVKGKIDAYRKFKANMLLELQKTFPNEMNKYRAIRGDE
Length499
PositionMiddle
OrganismPhlebotomus papatasi (Sandfly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Psychodoidea> Psychodidae> Phlebotomus> Phlebotomus.
Aromaticity0.11
Grand average of hydropathy-0.403
Instability index34.74
Isoelectric point6.21
Molecular weight57560.06
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
metal ion binding	GO:0046872	IEA:UniProtKB-UniRule
metalloendopeptidase activity	GO:0004222	IEA:InterPro
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09156
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.15|      16|      17|     300|     316|       1
---------------------------------------------------------------------------
  301-  316 (28.60/20.69)	ASNNPEALAAVGRRFR
  321-  336 (30.55/16.93)	AMGGACAPAEVFRRFR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     128.16|      41|      52|     370|     411|       2
---------------------------------------------------------------------------
  370-  411 (63.05/47.97)	KNPLENLETNLEMF..IENVRQIRIIVSDFQAQGQNVlNQKIQG
  423-  465 (65.11/44.90)	KSQVQNVHVPFEVFdyIDQGKNPQLYTKDCIDKARNK.NEEVKG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.46|      29|     160|      57|      88|       3
---------------------------------------------------------------------------
   57-   88 (46.64/41.54)	GVDTWHEdvRYFDVLDEE.QPVAGFYLDLYtRE
  220-  249 (51.82/34.21)	GYDLCQE..LYFSALDMElHARKDFWVDVM.RE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09156 with Med10 domain of Kingdom Metazoa
Unable to open file!