<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09128

Description Uncharacterized protein
SequenceMALSFTRQPRVCREFVVRLTGLLPAPKKYSTPSKTRVGFFVPQKFRNVPEMHGIICFRLTGGKSESYANLAEGMATALVCFDDLEERRDQGTPTQKHCILICNSVPYSMPVQECYMYENKTVDQLATIFQEKEINFSILSPRKIPVLFKLFEKSGGDLSSSTSKNYCKDPRHLVLLKGYSLKERPASPPAAATINLPSPLASNMMPMNNQMEAAGNQMLAAQQINQPGPMRTNMNNPGMFPDAMQNPMGNPNIPRPGLMYPGQGPNPNQMNPPGFHCTPQSDGYVHAIQSQCAATTDGATNAKSKVDDATTAAASFPPKSRTESATAADANAAATAISSHYATQYSTAQHGVSGSWSDEQYGAAASHPDATYESAATAAAATTTAAAAATTPTTAAAAAAAKSAADAAAKPRSRCNKIKGHKSTNRCPKISPHQHNSIWHQQVVFPRWQLVVLPVGNQPPIQGRKFGLGFWSGLRRQRAINPKLHATYRAMSQLISKMVNQN
Length502
PositionUnknown
OrganismLutzomyia longipalpis (Sand fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Psychodoidea> Psychodidae> Lutzomyia> Lutzomyia.
Aromaticity0.07
Grand average of hydropathy-0.445
Instability index43.42
Isoelectric point9.53
Molecular weight54268.12
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09128
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     134.02|      28|      28|     191|     218|       1
---------------------------------------------------------------------------
  191-  218 (52.67/26.26)	AATINLPSP..LASNMMPMNN...QMEAAGNQM
  221-  248 (44.15/20.87)	AQQINQPGP..MRTN...MNNpgmFPDAMQNPM
  250-  274 (37.19/16.47)	NP..NIPRPglMYPGQGPNPN...QMNPPG...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      98.87|      18|      23|     296|     313|       2
---------------------------------------------------------------------------
  296-  313 (30.88/15.79)	TDGATNAKSKVDDAT.....TAA
  322-  334 (21.31/ 8.82)	TESATAA.....DAN.....AAA
  357-  379 (24.28/10.99)	SDEQYGAAASHPDATyesaaTAA
  383-  396 (22.40/ 9.61)	TTAAAAATT....PT.....TAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.92|      13|      21|      45|      57|       3
---------------------------------------------------------------------------
   45-   57 (26.26/16.89)	FRNVPE..MHGIICF
   67-   81 (17.66/ 9.23)	YANLAEgmATALVCF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.74|      13|      28|     141|     153|       4
---------------------------------------------------------------------------
  141-  153 (22.95/14.58)	PRKIPVL..FKLFEK
  170-  184 (15.79/ 7.98)	PRHLVLLkgYSLKER
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09128 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ASPPAAATINLPSPLASNMMPMNNQMEAAGNQMLAAQQINQPGPMRTNMNNPGMFPDAMQNPMGNPNIPRPGLMYPGQGPNPNQMNPPGFHCTPQSDG
2) HAIQSQCAATTDGATNAKSKVDDATTAAASFPPKSRTESATAADANAA
186
286
283
333










Molecular Recognition Features






MoRF SequenceStartStop




1) AAAAAAAKSAADAAAK
395
410