<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09099

Description Uncharacterized protein
SequenceMSGQYPGGYNNAISGHRGQFNAQQQQQQQQQQMMNQLQMGGQHGGPGGMMSMGSMGYNQGGMMQQQQQGIGPGVMNPVGMQSPSHVQQQLMQQQQIQMQQQQQQMGPQMGMVNQPGLSPQQPHKEINIVALSRVGQETVQDITSRFQEIFTALKVIQPTANRDNSTVKKVQEHFRTIRLLFKRMRLIYERCNDGYPQGMEYTTVESLIPFKDEPEHRLGLEATQCEEYRKALQENQELIDTVKLKNRQLREIIDRTRIIVWEINTMLSMRKS
Length272
PositionHead
OrganismGlossina palpalis gambiensis
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea> Glossinidae> Glossina.
Aromaticity0.05
Grand average of hydropathy-0.827
Instability index50.06
Isoelectric point9.10
Molecular weight31166.19
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09099
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     152.20|      34|      38|       1|      35|       1
---------------------------------------------------------------------------
    1-   35 (67.24/29.32)	MSGQY..PG.....GYNNaIS.GHRGQFNAQQQQ...QQQQQQMMN
   39-   71 (53.56/19.48)	MGGQHggPG.....GM...MSmGSMG.YN.QGGM...MQQQQQGIG
   72-  105 (31.40/ 8.34)	.......PGvmnpvGMQS..P.SHVQQQLMQQQQiqmQQQQQQM..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.82|      19|      32|     181|     200|       2
---------------------------------------------------------------------------
  181-  200 (32.72/27.06)	FK.....RMRLIYERCNDgYPQGME
  210-  233 (27.10/16.63)	FKdepehRLGLEATQCEE.YRKALQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.11|      13|      20|     124|     138|       3
---------------------------------------------------------------------------
  124-  138 (13.03/19.44)	KEInIVALsRVGQET
  147-  159 (23.08/17.08)	QEI.FTAL.KVIQPT
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09099 with Med30 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MSGQYPGGYNNAISGHRGQFNAQQQQQQQQQQMMNQLQMGGQHGGPGGMMSMGSMGYNQGGMMQQQQQGIGPGVMNPVGMQSPSHVQQQLMQQQQIQMQQQQQQMGPQMGMVNQPGLSPQQPHKEINIVA
1
130










Molecular Recognition Features






MoRF SequenceStartStop




1) YPGGYN
5
10