<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09090

Description Uncharacterized protein
SequenceMTVKLGKLFGTNSSNNSTTHNKMSSPPPLPPPNPSLSCNYYNANTNQHHHQLQQKSQRAFNPYVDEMEDDNISLYSTTASIITARDHPYNNSQRPLLADRKPQLLLGSNASNNKKKTKNQTAANQQSSPKLSQNQHQQQQQQQQQPQQQQQQQQQQQQEQKQKPEQKSYISPYVQQQKRDSVKGLHGFNDFDILSQQYNKHLQSPHIGYPYGSPPSPNSNSTAVDFVFDSAESTTTPIYRNNYASISTPLTVTTCYGNAVCDYGSTLATSATIEVNEIDYYRSNTNVDAINKLSRFEDDFCNRRNINFSKIDKKLTTSDDTNLYEGPFIFGIPPEQQTDFTRLGINGRSFDDITSCKAVLTNNGKQKLDKSMKQTVTHVKIMEQKGVCESHNEICLEIFSLMSDLL
Length406
PositionKinase
OrganismGlossina palpalis gambiensis
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea> Glossinidae> Glossina.
Aromaticity0.08
Grand average of hydropathy-0.977
Instability index58.84
Isoelectric point8.04
Molecular weight45936.16
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09090
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.71|      16|      16|     133|     148|       1
---------------------------------------------------------------------------
  133-  148 (34.13/14.60)	QNQHQQQQQQQQQPQQ
  151-  166 (30.57/12.43)	QQQQQQQQEQKQKPEQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.94|      16|      19|     234|     252|       2
---------------------------------------------------------------------------
  234-  252 (24.17/20.59)	TTtpiYRN...NYAS.ISTPLTV
  254-  273 (20.77/ 9.51)	TC...YGNavcDYGStLATSATI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.29|      18|      19|     282|     299|       3
---------------------------------------------------------------------------
  282-  299 (30.67/24.16)	RSNTNVDAINKLSRFEDD
  303-  320 (30.63/24.12)	RRNINFSKIDKKLTTSDD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     114.34|      39|     107|      62|     117|       4
---------------------------------------------------------------------------
   62-  117 (53.99/54.48)	PYVDEMEDDNI.SLysttasiitardHPYNN....SQR.......PLLAdrKPqllLGSNASNNKKKT
  172-  222 (60.35/29.40)	PYVQQQKRDSVkGL............HGFNDfdilSQQynkhlqsPHIG..YP...YGSPPSPNSNST
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.24|      11|     102|      16|      26|       7
---------------------------------------------------------------------------
   16-   26 (21.65/11.19)	NSTTHNKMSSP
  119-  129 (20.59/10.33)	NQTAANQQSSP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09090 with Med12 domain of Kingdom Metazoa
Unable to open file!