<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09064

Description Uncharacterized protein
SequenceMKENKILKLIHVAWRERWSDSQFGINIKNVLPRGVSGDVYNLADCILQQALIGSTANPLVLNYLKHSLCAHLVSHAAVLRRIAKYEHFERLYCTTSLLDFLDSVIAGATCRAKTEEAILPGAVVSLINWLMQVFAMITAHYEIHRELNSEQSYMLGQCCLVIEKIIKNQFLMATIYVGCHEDPDYYGQIREKYAAIKTSLTNSNFSPTHPSIETYLHQLAYIDVHHLDMPLLDIQPKPEPVTYCVQPLLTVDVLLNPCNDTSYYVAKMQMVQRLKKFSNTRLFYEIVRAGFVSLSNVMETTHDTMWGAFTFFKVPQIIKQLQALNRAVGEQTPNDYIPEVVEAIELLLEDKLLLDFMDSKCSCNIIEYLLNDWTKQHLVNDMHVKHFAAQREGTSVLLQKRDASAQAPSIINFIIRAEVPLSGVLKTLSTDYNKVQEALLGVLCQVLVGNSFDLILSVATVEGRLKTFVSRLIQCNENSKQVPGEMGKASIIRSTLFDVSFLMLTFIVQTYGSDAVLSNNGDSFFEKWVRECMVERNKPKNPRNMIVMCDENMVDELLLNLSKPEPQLKNINITWQDICLNLPGVLYQVLIAWEKETLSSGDVKNILDNIKRRLFSFSVCATSFLCAYMCSVKENELLKPLNMIQQFLAPPSAEEMSSQENIKERLGLSFQIIRKMQHDVRPTVNPKSRSITLVQNLVSQTPLMDQFRDVWRTVNESGWLPIRAAQILESLLHAGGAAWLTTRLLEEILKCKYIHDMMKTMDIVFAILHLDIELSTEALLTQVVPAMIQNRQGEDIDEPHLHVLARLCVYCIISAVETRHYRNFSYQKKRSRSHDGDDMDLNNTVKMRKINTDSSDNSSSNDFLGDTNLFNTHTSTHLRNTPNQLKESLQNSIQYIFKIFQHFLQTDKLSLKVYFVYQFVSLLVECGQERVRLVLNLLPTNLINNLLKVMLTDQISVGLIARLYDLRTSCGRQAAVADLTLWRNLKLKEQSINL
Length994
PositionTail
OrganismGlossina pallidipes (Tsetse fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea> Glossinidae> Glossina.
Aromaticity0.08
Grand average of hydropathy-0.054
Instability index39.07
Isoelectric point6.63
Molecular weight113497.27
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09064
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     200.45|      50|     141|     425|     475|       2
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  425-  474 (76.43/39.92)	LKTLSTDYN...KVQEAL..LGVLCQVLVGNSFDLILSVATVEGRLKTFVSRLIQ
  568-  616 (78.35/41.15)	LKNINITWQ...DICLNL..PGVLYQVLIAWEKE.TLSSGDVKNILDNIKRRLFS
  621-  666 (45.66/25.25)	ATSFLCAYMcsvKENELLkpLNMIQQFLAPPSAEEMSSQENIKERL.........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     387.91|     128|     150|      58|     205|       3
---------------------------------------------------------------------------
   58-  146 (95.64/90.05)	................................................................PLVLNYLkHSLCAHLVSH..AAVLRRIAKYEHFErlYCTTS.......LLDFLDSVIagATCRAKTEEAILpgAVVSLINWLMQvFAMITAHYEIHRE
  147-  289 (200.50/171.07)	LNSEQSYMLGQCCLV.IEKIIKnQFLMATIYVGCHEDPDYYGQIREkyaAIKtsltnsnfspthPSIETYL.HQLAYIDVHHldMPLLDIQPKPEPVT..YCVQP.......LLT.VDVLL..NPC.NDTSYYV...AKMQMVQRLKK.FSNTRLFYEIVRA
  298-  370 (91.77/60.66)	METTHDTMWGAFTFFkVPQIIK.QLQALNRAVGEQTPNDYIPEVVE...AIE.....................................................llledklLLDFMDS.....KCSCNIIEYLL...........................
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.31|      30|     188|     730|     761|       4
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  730-  761 (47.63/41.54)	SLLHAGGAAwlTTRLLEEILKCKYIHDMMKTM
  921-  950 (49.68/34.65)	SLLVECGQE..RVRLVLNLLPTNLINNLLKVM
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09064 with Med24 domain of Kingdom Metazoa
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