<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09049

Description Uncharacterized protein
SequenceMEMQILEAVNNYMKVEPIEEAFASVIVYKADCEQEKSFKFANDIVSAFSNVSQENKEHIIRQYLQKAASAHNINHLQVLMSTLAKLTEAHLITAKMLCDKILLCDKLTNENKNFWIESFKLIKKVISHVDYKGVREILKVCRDKAQSFGLNINVSYLPQLLVLEDIIKHIFDRNNCLLPAYFIANEILKPFPYHWKFNKLTTDFVEEFRQTAQMVSIIGHAHMFPIVEHFGYADHLMNSWKLDPNTLKFILKGNLPYEPELVEEQSQLLRYVLEQTYSKEMVSIMLNLQKQQKQRCNTLEEELVNLIINAMEMTETTDNAGSGFNAPDEQISQNEWVWLHLSSQLIYFVLFQFVSFMHIVLALYDKLSKLELRKGRDQLMWILLQFISGSIQKNPISNFLPMFKLFDLLYPEQEPLKLPDCNKSSSLRQMAPICIWIHLMKKARAENMNISRPLPTALKNHHDFLQHLVMSNTIMSMSLGNDFRIILICNAYSTNQEYFSRPLNVLVEALSGNVKSNTGSPIGPVPFSMVVLDSLTVHSKMSLIHNFVGQMIKQAQNKTSVPTPALVETYARLLVYTEIESLGIKGFLNQLLLQVFKHQAWGILHTLLEMFSYRLHHIPPHYRVQLFESTALRLINGLGSAEIQPQFSRHFSEKPASSVASSECEELNRVLILTLARSMHIICSGDEMQPWCKELLSTIMQNTPHSWASHSLACFPTVLSEFFSQNNHPIENKQLLKKSVEEEYRNWTSMTNENDIINHFIKPNTSPLFLCLLYKMIWETENISPVAYKILEGISARALSANLRKLCDYLVNEVASSNGKEFIHKCVDSINNMIWKYNVVTIDRVVLCLALRTQEGNEAQVCFLIIQLLLLKASELRNRVTEFCKENNPDHWKQNNWQENVKISMKSTYHFTRNTQKNLLLMNRPHIHLCQFTFQMFLPVLDVVIHRFIELPIQHVHQILEVILDHLSILYKFHDRPITYLYNTLHFYERILRDRPSLKKKLVSAITGAFCDIRPPNWCVSDQYKMFLQSADILWNPELTYYINIIRRLAETVSGKNVFYNTDWRFNEFPNATAHAMYVTCAELLSLPLAPNIVANNVIDVVLKGYALIPPREIYNYINAVGIVLAELPETYWSVVYERLQEVLNLPKMLRWTYRFNAFELLNFKTVRQAMIDKTYAATLAVTHSVFHHMGCFKLATITKYIKEKLKPCVRTESQLVFLCHVFGPFLQRIEQEKPNAVAGIAILLYEMLEVVDKQHGPTALEYMDPICDLLYHIKYIYVGNIIKNESEAIIKRLRPVLQKRLRFVTHLNIEDKHNEKPNEIQHTPTTNYTLPNHSKQANGNEQEGYSLKYLKREEKNCVHNK
Length1362
PositionTail
OrganismGlossina fuscipes fuscipes (Riverine tsetse fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea> Glossinidae> Glossina.
Aromaticity0.10
Grand average of hydropathy-0.126
Instability index45.34
Isoelectric point8.07
Molecular weight158195.05
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09049
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     227.60|      54|      54|     381|     434|       1
---------------------------------------------------------------------------
  347-  401 (81.61/51.29)	YFVLFQFVSFMHIVLALYDKLSKLELR...KGRDQLmW...............ILLQFISGSIQKNPISNFLP
  402-  455 (86.39/54.75)	MFKLFDLLYPEQEPLKLPDCNKSSSLR...QMAPICiW...............IHL.MKKARAENMNISRPLP
  458-  524 (59.60/35.34)	LKNHHDFL....QHLVMSNTIMSMSLGndfRIILIC..naystnqeyfsrplnVLVEALSGNVKSNTGSPIGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     145.06|      50|      54|     757|     810|       2
---------------------------------------------------------------------------
  757-  810 (69.05/58.85)	INHFIKPNTSPlFL..CL..LYKMIWETeNISPVAyKILEGISARALSANLRKLCdYL
  811-  864 (76.01/45.96)	VNEVASSNGKE.FIhkCVdsINNMIWKY.NVVTID.RVVLCLALRTQEGNEAQVC.FL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     193.03|      57|     730|     192|     256|       3
---------------------------------------------------------------------------
  192-  256 (96.59/81.72)	PYHWKFN......KLTTDFVEEF.RQTAQMVSIIGHAHMfpiveHFGYADHLMNSWKLDPNTLKFIlkgNLP
  889-  952 (96.44/62.45)	PDHWKQNnwqenvKISMKSTYHFtRNTQKNLLLMNRPHI.....HLCQFTFQMFLPVLDVVIHRFI...ELP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.81|      21|      58|    1068|    1088|       4
---------------------------------------------------------------------------
 1068- 1088 (37.90/24.56)	EFPNATAHAMYVTCAELLSLP
 1127- 1147 (37.90/24.56)	ELPETYWSVVYERLQEVLNLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.85|      36|      81|      36|      74|       5
---------------------------------------------------------------------------
   36-   74 (55.68/43.13)	KSFKFANDIVsafSNVSQENKEHIIRQYLQKAAS.AHNIN
  117-  153 (56.17/35.41)	ESFKLIKKVI...SHVDYKGVREILKVCRDKAQSfGLNIN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.90|      37|     287|     957|    1002|       8
---------------------------------------------------------------------------
  957-  993 (64.50/69.60)	HQILEVILDH......LSILYK.FHDRPITYLYNTLHFYERILR
 1004- 1047 (55.40/37.21)	SAITGAFCDIrppnwcVSDQYKmFLQSADILWNPELTYYINIIR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.67|      13|     304|     259|     271|      10
---------------------------------------------------------------------------
  259-  271 (23.49/17.63)	PELVEEQSQLLRY
  564-  576 (23.18/17.28)	PALVETYARLLVY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.65|      12|     148|    1200|    1211|      11
---------------------------------------------------------------------------
 1200- 1211 (22.65/12.88)	KYIKEKLKPCVR
 1349- 1360 (23.00/13.19)	KYLKREEKNCVH
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09049 with Med23 domain of Kingdom Metazoa
Unable to open file!