<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09048

Description Uncharacterized protein
SequenceMSGQYPGGYNNAISGHRGQFNAQQQQQQQQQQMMNQLQMGGQQQGIGPGVMNPVGMQSPSHVQQQLMQQQQIQMQQQQQQMGPQMGMVNQPGLSPQQPHKEINIVALSRVGQETVQDITSRFQEIFTALKVIQPTANRDNSTVKKVQEHFRTIRLLFKRMRLIYERCNDGYPQGMEYTTVESLIPFKDEPEHRLGLEATQCEEYRKALQENQELIDTVKLKNRQLREIIDRTRIIVWEINTMLSMRKS
Length248
PositionHead
OrganismGlossina fuscipes fuscipes (Riverine tsetse fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea> Glossinidae> Glossina.
Aromaticity0.05
Grand average of hydropathy-0.839
Instability index50.72
Isoelectric point9.12
Molecular weight28724.40
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09048
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     142.57|      40|      45|       6|      48|       1
---------------------------------------------------------------------------
    6-   48 (67.71/33.28)	PGGYNNAiSGHRGQFNaQQQQ...QQQQQQMMNQLQMGgQQQGIGP
   53-   95 (74.86/27.83)	PVGMQSP.SHVQQQLM.QQQQiqmQQQQQQMGPQMGMV.NQPGLSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.82|      19|      32|     157|     176|       2
---------------------------------------------------------------------------
  157-  176 (32.72/21.80)	FK.....RMRLIYERCNDgYPQGME
  186-  209 (27.10/13.38)	FKdepehRLGLEATQCEE.YRKALQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.11|      13|      20|     100|     114|       3
---------------------------------------------------------------------------
  100-  114 (13.03/20.86)	KEInIVALsRVGQET
  123-  135 (23.08/18.32)	QEI.FTAL.KVIQPT
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09048 with Med30 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MSGQYPGGYNNAISGHRGQFNAQQQQQQQQQQMMNQLQMGGQQQGIGPGVMNPVGMQSPSHVQQQLMQQQQIQMQQQQQQMGPQMGMVNQPGLSPQQPHKEINIVA
1
106










Molecular Recognition Features






MoRF SequenceStartStop




NANANA