<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09045
Description |
Mediator of RNA polymerase II transcription subunit 15 |
Sequence | MSDDWQSQQFRQSAIAKIKDLLQASGQHLDKNANVMENHIFKKSKSKEEYMTLLTKIYSHFKENSRKLTNEISQQNMMQDPLNALQNLASQGNRNPQMMSMGGGPGGPVTASNLLQSLNQQRPGQQQMQQMQGMRPQMPMGGGVPGQQQNVVGGPSSQQQMMNQMVGPGGLQMNIMGGPGGPQQNQMVGNAQQMTAGGSGPGVGQGLGPGQMNQMVGPGSGGPMGSGAGGPNQMQMQAAAGQMQGGPMNVHGMNVQQLPGQMPQQQMQQMSMQQHSQLNQMMNARMNQTGPGGNITVGAGPTGGAAQGMQGLPGNLQQNQGAGAVSQMHSGNVSGGPQVPSSAMGNNAGQGNLNQMLNMPPGMQKNPNMPLAQNNQMFNVNRGVVGQQQFLRQSPSPSTVSSPAGGLTVQQQQQQQQLQQVVNNQQQLQQQQQQQANQTGGPQSNQALPNAQMIPSPALVPTSSPQMSGLMQNPNQRQMRQSPSSNLNTPGQVANSPFNPHEEQLYREKYKQLTKYIEPLKRMVAKFSNDGAQIEGQTKMRKLLEILSNPSQRVSLETLLKCEKVLEKMEIGNIVQQFGKSPNPLMEVITNTLQSPIANHTLYRTFRPTLELLLGTDISAPPPLKKSKTTNSNETEIPHLLQGELARLDTKFKVSLDTTVQNNTQSIKLICCLDDKKLPSVPPININIPEEYPLSSPDCILIEQDYTCTSFLKSVQSAFTARIAKLPKLYSLSHLLNTWEMSVRQACSPNASKPICELTALFGM |
Length | 764 |
Position | Tail |
Organism | Glossina fuscipes fuscipes (Riverine tsetse fly) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea>
Glossinidae> Glossina.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.652 |
Instability index | 58.25 |
Isoelectric point | 9.42 |
Molecular weight | 82694.19 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364148
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP09045
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
7| 542.65| 73| 73| 211| 283| 3
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93- 138 (61.12/13.77) NRNpQMMSMG.GGP...........GGPvtasN....................LLQ...S.............LN.QQR..P.GQ....QQ....MQQMqGMR.....PQM.....................
139- 208 (62.02/14.10) .............P......MGGGV..P....G....................QQQ......NVVGGPSSQQQM.MNQMvgP.GGL....Q....MNIM.GGPGGPQQNQMvgnaqqmtaggsgpgvgqgLG
211- 283 (156.12/48.67) QMN.QMVGPGSGGP......MGSGAGGP....N....................QMQMQAAAGQMQGGPMNVHGMNVQQL..P.GQM.PQQQ....MQQM.SMQQHSQLNQM...................MN
285- 332 (67.33/16.05) RMN.Q.TGPG..GN......ITVGA.GP...............................TGGAAQG..M.......QGL..P.GNL.QQNQgagaVSQM.....HSG.N.......................
333- 379 (63.88/14.78) .........VSGGPqvpssaMGNNAGQG....N...........................LNQMLNMP...PGM..QKN..P..NM.P.............LAQN...NQM...................FN
387- 475 (85.41/22.69) QQQ.FLRQSPSPST......VSSPAGGL....TvqqqqqqqqlqqvvnnqqqlQQQQQQQANQ.TGGPQS....N.QAL..PnAQMiPSPA....LVPT.SSPQMSGLMQN...................PN
478- 513 (46.77/ 8.50) QMR.Q..SPSS..N......L...........N..........................TPGQVANSPFNPH.........E.EQL.YREK....YKQL.................................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 66.94| 21| 45| 589| 611| 4
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589- 611 (31.69/25.86) ITNTLQSPIANhtLYRTFRPTLE
637- 657 (35.25/21.51) IPHLLQGELAR..LDTKFKVSLD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.66| 16| 112| 549| 586| 5
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520- 540 (21.42/30.26) LKRM.....VAKFSNDGAQIegqtkM
566- 586 (23.24/15.13) LEKMeigniVQQFGKSPNPL.....M
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 66.87| 20| 29| 21| 40| 7
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21- 40 (33.93/23.06) LLQASGQHLDKNANVMENHI
53- 72 (32.94/22.18) LLTKIYSHFKENSRKLTNEI
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