<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09021

Description Uncharacterized protein
SequenceMEVQILETVKQYLKVEPIEEAFVSVIVYKADGEQEKSTKFLNDIVNAFSVLSQENKEPIIRQYLQRAALAYNINHLRVLMATLAKLVESHLITAKMLCDKILLCDKLIYENKNFWIESFKLIKKVISQVDYKGVREILKVCRDKAQTFGLTINVTYLPQLLALEDIIKHIFDRNNCLLPAYFIANEILKPFPYHWKFNKLTTDFVEEFRQTAQMVSIIGHSHMLPIVEHFGYADHLMNSWKLDPNTLKFILKGNLPYEPELVEEQPQLLRYVLEQTYSKEMVSIMLNLQKQQKQRCNTLEEQLVNLIINAMEMTETNDNTAGSGFNVPDEQISQNEWVWLHLSSQLIYFVLFQFVSFMHIVLALYEKLSKLELRKGRDQLMWILLQFISGSIQKNPISNFLPMFKLFDLLYPEQEPLKLPDCNKSSALRQMAPICIWIHLMKKARAENMNISRPLPTALKNHHDFLQHLVMSNSVMSMNLGNDFRIILICNAYSTNQEYFSRPLNVLVEALSGNVKSNTGNTIGPVPFSMVVLDSLTVHSKMSLIHNFVGQMIKQAQTKTSVPTPALVETYARLLVYTEIESLGIKGFLNQLLLQVFKHQAWGILHTLLEMFSYRLHHIPPHYRVQLLSHLHSLASMPQTNKMQLNLCFESTALRLINGLGSAEIQPQFSRHFSEKPAGSVASSECEELNRVLILTLARSMHIICSGDEMQPWCKELLNTIMQNTPHSWASHSLACFPTVLSEFFSQNNHPIENKQLLKKSVEEEYRNWTSMTNENDIINHFIKPNTSPLFLCLLYKMIWETENISPVAYKILEGISARALSANLRKLCDYLVNEVASSNGKEFIHKCVDSINNMIWKYNVVTIDRVVLCLALRTQEGNEAQVCFLIIQLLLLKASELRNRVTDFCKENNPDHWKQNNWHEKHLSFHQKYSEKFAPDESASHPPLPVYFSNVCLRFLPVLDVVIHRFIELPIQHVHQILEVILDHLSILYKFHDRPITYLYNTLHFYERILRDRPSLKKKLVSAITGAFCDIRSPTWCVSEQYKMFLQSPDLLWNPELTYYINIIRRLAETISGKNVFYSTDWRFNEFPNATAHAMYVTCVELLSLPLSPTIVANNIIDVALKGYALICPRDIHNYINAIGIVLAELPEQYWSVVYDRLQEILNLPKMLRWTYRFNAFELFNFKTVRQAMIDKTYAAILAVAHSVFHHMGCFKLATMTKYIKEKLKPCVHTESQLVFLCHVFGPFLQRIEQEKPNAVAGIAILLYEMLEVVDKHHGPTPLEYIDPICDLLYHIKYIYVGNIIKNESEAIIKRLRPVLQKRLRFHADLSIWKHDTAGDEVLLMSHEIRCCTVLKGEFSGIESLKSKNHGVDY
Length1371
PositionTail
OrganismGlossina brevipalpis
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea> Glossinidae> Glossina.
Aromaticity0.10
Grand average of hydropathy-0.053
Instability index43.47
Isoelectric point7.58
Molecular weight158857.26
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09021
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     141.72|      43|     305|     960|    1021|       1
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  224-  268 (69.67/33.82)	LPIvEHFGYA.....DHLMNSWKLDPNTLKFiLKGNLPYEPELVEEQPQL
  970- 1017 (72.06/50.41)	LPI.QHVHQIlevilDHLSILYKFHDRPITY.LYNTLHFYERILRDRPSL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     163.97|      52|     304|     439|     516|       2
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  447-  509 (74.37/103.81)	ENMNISRPLPTALKnhhdFLQHLVMSNsvmSMNLGNDFRIILICNAystnQEYFSRPLNVLVE
  518-  569 (89.59/52.45)	NTGNTIGPVPFSMV....VLDSLTVHS...KMSLIHNFVGQMIKQA....QTKTSVPTPALVE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     355.29|     120|     676|      26|     181|       3
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   26-  181 (172.87/196.40)	IVYKADGEQEKSTKFLNDIVNAF.............SVLSQ...ENKEPIirqylqraalayNINHLrvlmatLAKLVE................SHLItaKMLCDKILLC..DKLIYENKNfwiesfklikkvISQVDYKgvreILKVCRDKAQTFGLTINVTYLPQLLAL...EDIIKHIFDRNNCLLPAY
  703-  859 (182.42/128.53)	IICSGDEMQPWCKELLNTIMQNTphswashslacfpTVLSEffsQNNHPI............ENKQL......LKKSVEeeyrnwtsmtnendiiNHFI..KPNTSPLFLCllYKMIWETEN............ISPVAYK....ILEGISARALSANLRKLCDYLVNEVASsngKEFIHKCVDSINNMIWKY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     135.22|      45|     584|     282|     337|       6
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  282-  337 (61.50/78.70)	VSIMLNLQKQQKQrcntlEEQLVNLIIN.....AMEMteTNDNTagsGF...NVPDeQISQNEW
  867-  919 (73.72/54.30)	VVLCLALRTQEGN.....EAQVCFLIIQllllkASEL..RNRVT...DFckeNNPD.HWKQNNW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     270.83|      85|     886|     341|     439|       7
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  341-  439 (138.87/107.91)	HLSSQLIyFVLFQFVSFMH............IVLALYEKLSKLELRKGRDQLMWIllqfisgsiqkNPISNFLPMFKLF...DLLYPEQEPL..KL.PDCNKSsaLRQMAPICIWIH
 1230- 1332 (131.95/76.36)	HTESQLV.FLCHVFGPFLQrieqekpnavagIAILLYEMLEVVDKHHGPTPLEYI...........DPICDLLYHIKYIyvgNIIKNESEAIikRLrPVLQKR..LRFHADLSIWKH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09021 with Med23 domain of Kingdom Metazoa
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