<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09010

Description Uncharacterized protein
SequenceMKENKILKLIHVAWRERWSDSQWGINIKNVLPRGVSGDVYNLADCILQQALIGSTANPLVLNYLKHSLCAHLVSHAAVLKRIAKYEHFERLYCITSLLDFLDSVITGVTCRTKTEEAILPGAVVSLTSWLMQVFAMITAHYEIHRELNSEQSYMLDQCCLVIEKVIKNQFLMSTLYVGCHEDPDYYGQIRERYAAIKTSLTNSNFSPTHPSIETYLHQLAYVDVHHLDMHLLDIQPKPEPVTYCVQPLLTVDVLLNPCNDTSYYVAKMQMVQRLKKFSNTRLFYEIVRAGFVSLSNVMETTHDTMWGAFTFFKVPQIIKQLQALNRAVGEQTPNDYIPEVVEAIELLLEDKLLLDFMDSKCSCNIIEYLLNDWTKQHLVNDMHVKHFAAQRESTSVLLQKRDASAQAPSIINFIIRAEVPLSGVLKTLSTDYNKVQEALLGVLCQVLVGNSFDLILSVATVEGRLKTFVSRLIQCNENSKQVPGEMGKASIIRSTLFDVSFLMLTFIVQTYGSDAVLSNNGDSFFEKWVRECMIERNKPKNPRNMIVMCDENIVDELLLNLSKPEAQLKNTNITWQDICLNLPGVLYQVLIAWEKETLSSADVKNILDNIKRRLFSFSVCATSFLCAYMCSVKENELLKPLNLIQQFLAPPSAEEMSSQENIKERLGLSFQIIRKMQHDVRPTVNPKSRSITLVQNLVSQTPLMDQFQDVWRTVNENGWLPIRAAQILESLLHAGGPAWLTTRLLEEILKCKYIHDMMKTMDIVFAILHLDIELCTEALLTQVVPAMIQNRQGEDIDEPHLHVLARLCVYCIISAVETRHYRNFSYQKKRSRSHDGDDMDLNNTVKMRKINTDSSDNSSSNDFLGDGNLFSTHTSTHLRDTPNQLKESLQNSIQYIFKIFQQFLQTDKLSLKVYFVYQFVSLLVECGQERVRLVLNLLPTNLINNLLKVMLTDQISVGLIARLYDLRTSCGRQAAIADLSLWRNLKLKEHSIHL
Length994
PositionTail
OrganismGlossina brevipalpis
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea> Glossinidae> Glossina.
Aromaticity0.08
Grand average of hydropathy-0.059
Instability index38.56
Isoelectric point6.44
Molecular weight113661.32
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09010
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     396.42|     133|     148|      84|     230|       1
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   78-  227 (188.18/167.91)	VLK...riaKYEHFErlYCITSLLDfLDSVITgvTCRtKTEEAIlpgAVVSLTSWLMQvFAMITAHYEIHRE........LNSEQSYMLDQCCLV.IEKVIKnQFLMSTLYVGCHEDPDYYGQIREryaAIKTSLTNS...NFSPTHPSIETYLHQLAYVDVHHL
  228-  378 (208.24/136.99)	DMHlldiqpKPEPVT..YCVQPLLT.VDVLLN..PCN.DTSYYV...AKMQMVQRLKK.FSNTRLFYEIVRAgfvslsnvMETTHDTMWGAFTFFkVPQIIK.QLQALNRAVGEQTPNDYIPEVVE...AIELLLEDKlllDFMDSKCSCNIIEYLLNDWTKQHL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     127.33|      42|     374|     545|     588|       2
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  545-  588 (66.46/45.13)	MIVMCDENIVdELLLNLsKPEAQLKN.TNITWQD.ICLNLPGVLYQ
  922-  965 (60.87/33.30)	LLVECGQERV.RLVLNL.LPTNLINNlLKVMLTDqISVGLIARLYD
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.79|      20|      49|     729|     748|       5
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  729-  748 (35.39/24.27)	ESLLHAGGPAWLTTRLLEEI
  777-  796 (34.40/23.40)	EALLTQVVPAMIQNRQGEDI
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     140.51|      47|     632|       2|      58|       8
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    2-   58 (65.80/81.07)	KENKILKLIHVAWR.......ERWSDSQwgiNIKNVLprGVSGDVYNLAdcilqQALIGSTANP
  633-  686 (74.71/55.86)	KENELLKPLNLIQQflappsaEEMSSQE...NIKERL..GLSFQIIRKM.....QHDVRPTVNP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09010 with Med24 domain of Kingdom Metazoa
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