<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08984

Description Uncharacterized protein
SequenceDILIYCVSVLSVIYCGSVVCCVSCIYETLQRIVKISKEKNNSLVCALYLKFVVMEIQILETVNHYLKVEPIEEAFVSVIVYKADCEHEKSLKFVNDIVNTFSTVSQENKEHIIRQYLQKAATAHNINHLQVLMSTLAKLTEAHLITAKMLCDKILLCDKLTNENKNFWIESFKLIKKVISHVDYKGVREILKVCRDKAQSFGLNINVSYLPQLLALEDIIKHIFDRNNCLLPAYFIANEILKPFPYHWKFNKLTTDFVEEFRQTAQMVSIIGHAHMFPIVEHFGYADHLMNSWKLDPNTLKFVLKGNLPYEPELVEEQSQLLRYVLEQTYSKEMVSIMLNLQKQQKQRCNTLEEQLVNLIINAMEMTETTDNGGSGFNAPDEQISQNEWVWLHLSSQLIYFVLFQFVSFMHIVLALYDKLSKLELRKGRDQLMWILLQFISGSIQKNPISNFLPMFKLFDLLYPEQEPLKLPDCNKSSSLRQMAPICIWIHLMKKARAENMNISRPLPTALKNHHDFLQHLIMSNTILSMNLGNDFRIILICNAYSTNQEYFSRPLNVLVEALSGNVKSNTGSPIGPVPFSMVVLDSLTVHSKMSLIHNFVGQMIKQAQNKTSVPTPALVETYARLLVYTEIESLGIKGFLNQLLLQVFKHQAWGILHTLLEMFSYRLHHIPPHYRVQLLSHLHSLASMPQTNKMQLNLCFESTALRLINGLGSAEIQPQFSRHFSEKPASSVASSDCEELNRVLILTLARSMHIICSGDEMQPWCKELLSTIMQNTPHSWASHSLACFPTVLSEFFSQNNHPIENKQLLKKSVEEEYRNWTSMTNENDIINHFIKPNTSPLFLCLLYKMIWETENISPVAYKILEGISARALSANLRKLCDYLVNEVASSNGKEFIHKCVDSINNMIWKYNVVTIDRVVLCLALRTQEGNEAQVCFLIIQLLLLKASELRNRVTEFCKENNPDHWKQNNWHEKHLSFHQKYSEKFAPDESASHPPLPVYFSNVCLRFLPVLDVVIHRFIELPIQHVHQILEVILDHLSILYKFHDRPITYLYNTLHFYERILRDRPSLKKKLVSAITGAFCDIRPPNWCVSDQYKMFLQSADILWNPELTYYINIIRRLAETVSGKNVFYNTDWRFNEFPNATAHAMYVTCAELLSLPLAPTIVANNVIDVVLKGYALIPPREIHNYINAIGIVLAELPETYWSVVYERLQEVLNLPKMLRWTYRFNAFELLNFKTVQQAMIDKTYAAILAVTHSVFHHMGCFKLATITKYIKEKLKPCVHTESQLVFLCHVFGPFLQRIEQEKPNAVAGIAILLYEMLEVVDKHHGPTPLEYMDPICDLLYHIKYIYVGNIIKNESEAIIKRLRPVLQKRLRFVTHLNIEDKHNEKPNEIQHTPATNVNNITSCNQFPVTQSFSNINTQQQQQQPQLQQLQHQQQSQIHVQNLSQTVQQPSPISQMGGLVGQTAQQQQQQQQQQQLTQQQQHQLQQMQLQQQQIQQMQQQQYQLQQQQMQQHLQQQQHLQQQQTQNANMGPMRHN
Length1537
PositionTail
OrganismGlossina austeni (Savannah tsetse fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea> Glossinidae> Glossina.
Aromaticity0.09
Grand average of hydropathy-0.168
Instability index49.68
Isoelectric point7.73
Molecular weight178213.42
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08984
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     183.39|      34|      41|    1450|    1489|       1
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 1410- 1445 (59.06/23.97)	PVTQ..SFSNINTQQQQQQPQLQQLQHQQQSQIhvQNL
 1454- 1489 (62.65/39.28)	PISQmgGLVGQTAQQQQQQQQQQQLTQQQQHQL..QQM
 1490- 1508 (25.00/ 6.07)	...............QLQQQQIQQM.QQQQYQL..QQ.
 1509- 1531 (36.68/12.84)	.............QQMQQHLQQQQHLQQQQTQN..ANM
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     115.87|      38|      54|    1052|    1105|       2
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 1042- 1086 (61.00/50.44)	YK.FHDRPITYLYNTLHFYERILRdrpslkkKLVSAITG..AF..CDIRP
 1095- 1137 (54.87/55.79)	YKmFLQSADILWNPELTYYINIIR.......RLAETVSGknVFynTDWRF
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     139.92|      44|      54|     401|     454|       3
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  401-  454 (66.00/63.55)	FVLFQFvsfmhivlaLYDKLSKLE.........LRKGRDQLMWILLqFISGSIQKNPISNFLP
  456-  508 (73.93/46.99)	FKLFDL.........LYPEQEPLKlpdcnksssLRQMAPICIWIHL.MKKARAENMNISRPLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     190.82|      53|      55|     831|     885|       4
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  152-  211 (51.10/31.86)	.............DKILLCDKLTN..ENKNfwiesfklikkvISHVDYKgvreILKVCRDKAQSFGLN....INVSYLP
  831-  885 (85.69/67.24)	INHFI.KPNT...SPLFLCLLYKMiwETEN............ISPVAYK....ILEGISARALSANLR....KLCDYLV
  904-  958 (54.03/34.18)	INNMIwKYNVvtiDRVVLCLALRT..QEGN............EAQVCFL....IIQLLLLKA..SELRnrvtEFC....
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      91.32|      21|      58|    1139|    1159|       6
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 1139- 1159 (35.74/18.95)	EFPNATAHAMYVTCAELLSLP
 1179- 1195 (20.74/ 8.20)	LIPPREIHN.YINAIGIV...
 1198- 1218 (34.85/18.32)	ELPETYWSVVYERLQEVLNLP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     198.45|      54|      54|     614|     667|       8
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  614-  663 (73.77/42.19)	...........VPTPALVETYARLLVYTEIESLGI.......KGFLNQLLLQV.FKH..QAWGI.....LHTL..LEM
  664-  717 (61.43/33.88)	FSYR....lhhIP.P.....HYRVQLLSHLHSLAS.......MPQTNKMQLNLcFES..TALRL.....INGLgsAEI
  721-  795 (63.25/35.11)	FSRHfsekpasSVASSDCEELNRVLILTLARSMHIicsgdemQPWCKELLSTI.MQNtpHSWAShslacFPTV..LSE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     140.63|      34|      56|     224|     260|       9
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  224-  258 (61.44/40.78)	FDRNNCL....LPAYFiANEILKPFPY......HWKFNKLTTDFV
  277-  303 (32.69/12.02)	F.....P.............IVEHFGYadhlmnSWKLDPNTLKFV
  986- 1020 (46.49/24.41)	FAPDESAshppLPVYF.SNVCLRFLP.........VLDVVIHRFI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08984 with Med23 domain of Kingdom Metazoa
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