<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08966

Description Uncharacterized protein
SequenceMSGQYPGGYNNAISGHRGQFNAQQQQQQQQMMNQLQMGGPGGMMSMGYNQGGMMQQQQQVSPMQGMSGPTSGGIGVMNPVGMQSPSHVQQQLMQQQQIQMQQQQQQMGPQMGMVNQPGMSPQVMLQQQQQQQQQQLQQAQMHQNVNMQQSQQIQNSSGAAANMIMMAQQQTQQQQQQQQQQSQMQQQAQQAQTQQQMPQGSGSQGSQQPANNIMSISQQPHKEINIVALSRVGQETVQDITSRFQEIFTALKVIQPTANRDNSTVKKVQEHFRTIRLLFKRMRLIYERCNDGCLGYPQGMEYTTVESLIPFKDEPEHRLEATQCEEYRKALQENQELIDTVKLKNRQLREIIDRTRIIVWEINTMLSMRKS
Length371
PositionHead
OrganismGlossina austeni (Savannah tsetse fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Hippoboscoidea> Glossinidae> Glossina.
Aromaticity0.04
Grand average of hydropathy-0.939
Instability index70.04
Isoelectric point8.99
Molecular weight42318.38
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08966
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     284.93|      45|      46|     126|     170|       1
---------------------------------------------------------------------------
   22-   80 (71.47/18.02)	AQQQQQQQQMMNQLQMggpggmmsmgyNQGGMMQQQQQVspmQGMSGPTSGGIGVMNPV
   83-  118 (66.20/16.01)	QSPSHVQQQLMQQ...............QQIQMQQQQQ......QMG..PQMGMVNQPG
  126-  170 (87.11/23.97)	QQQQQQQQQQLQQAQM...........HQNVNMQQSQQI...QNSSGAAANMIMMAQQQ
  185-  219 (60.15/13.71)	..QQQAQQAQTQQ.QM...........PQGSGSQGSQQ.........PANN.IMSISQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     105.72|      28|      33|     259|     291|       2
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  236-  257 (25.59/10.48)	.....TVQDITSRFQEI...FTALKVIQPT
  259-  288 (40.47/43.06)	NRdnSTVKKVQEHFRTIRLLFKRMRLIYER
  327-  354 (39.66/23.76)	YR..KALQENQELIDTVKLKNRQLREIIDR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08966 with Med30 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GQYPGGYNNAISGHRGQFNAQQQQQQQQMMNQLQMGGPGGMMSMGYNQGGMMQQQQQVSPMQGMSGPTSGGIGVMNPVGMQSPSHVQQQLMQQQQIQMQQQQQQMGPQMGMVNQPGMSPQVMLQQQQQQQQQQLQQAQMHQNVNMQQSQQIQNSSGAAANMIMMAQQQTQQQQQQQQQQSQMQQQAQQAQTQQQMPQGSGSQGSQQPANNIMSISQQP
3
220










Molecular Recognition Features






MoRF SequenceStartStop




NANANA