<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08939

Description Uncharacterized protein
SequenceMPPHTRYPPGVNPYAPSSSTSSKTPTSSSASGLRSHRPNLPNRPNLQPPKLLLDDVDIEDFHPPEWRTVLNSKVDLGYPDFYPSRPGFDQPEDVLTEENVKNGFTGRNFIAVGAEVFSMHGPIHSHLSSGGLNLLSNLGKELIEKRQEMMPKIGERAFRIPVRVTYNDTKRLQFLNDLANPNVPLYKLMRNPVPHGFKGMELLDSMFSPNTSPAGSAHNRTPSGNPRLPSEPIPLDRALWFIRVLGSNEISAHRTRTQPTQHQNANTPIGAAPSPAAAATPSSTTTIITAPSLPVSSNDWYTQEFTNTFISWLRIQLGQLSLPNINKATTKPGVPPPKAAAGVLGDEKLRARWLIKWDYSTRLLRELHRRQLVSSRLLSGWMADYLGFANLAQVGFLAQLIGEYSGDLMKHLCNARHCLRNACEKLKEVRASPASSTLGKVEDMLIAIVKSFCESDEDVLLSPTTWKLHSNILSATVGRDLTQIKQRNEALRFAIDVDERSSSPRRQQMAEIQKLDSICEDTNMIELTRSFFDGTSSATNATPDLSRLEDKIFILLNWAMGLFQLGSHRPYAVYTILKHWHNQHEEHQSKQVKPQVIDLFPLLYKWLDTSPAARREENVQAIGITIGECTRQGMFSYGRYLQMLIAKGLTARTQPPARPPSHHLALLRAMPIFVVAKDLIQQRRIALSGDDAELRAKEDAEESMLMEQFKDEVMEYIPEVFGLEQYKNSEALRNVIDYQVPCSSRMSRYLYVQARFWLAPGAGQYLRGHNGISPMDASTFARVLQIFRTCRGHATIADFIIRAIQESEDEEILDVIVDTVHRDADMWTSMDGWSRLGDKLLDRYHSLQTQGKSHQRTLDLLDYLVKKGRLTADEEEEVKHIQEDLPKSTHALPPKLPFQESVYGLRQVLSGAKEESAVALAPKLYVRHGSFDNWRHQWWKIIIEILQHPSSHLAYDAVLRTVTSHIITVMQEARKPLEPTISAWLETLSAVSLIDTFGRRPGSLVAHVCLVLVVNRHLSSLTLLERVIYPIWKHTSNIVLTPRKRLSSKQVQAVGNTVNLFAQLLVSAPLVPYLPPTKPTDSLIVLAYRQAVFCGTSIQNLIRHLPLLVVLQKSALLPGHANITISSALRCLAMTAEFKTAAFRNLSVLKDAFLSTEWSKPSACHGLEAGMEDTLKLIMSEKPPNASTPTSKSRLSNFDNTARLSAWKWTRIVLEMRSDFKGLANRIINPENNAEDALQARHILNRQVIATLDRAATADDTDLLCEAFRGMDSIVTQEILVVGIDRLSSLLSQAIGAENQHHLEDSIKSIEQILRILHSTFNTSDSLSDSSILNARHKLLDLLTVALQSIDRGLSDTDLVIHHDISPPQPGDLLRVVLTLLRFVLGLSVIDNASPTAPKPNFPNLAVWFFKIMLTCQNVLDADAANMMSDMLSYIIDSTPPQSRLACQTALLGETNSSALQDILSASPILARSLPHLSPIRRNMALVTPDNGDEIVNGVDSAIHMDDKKWESFEQMNPLPKEPYHQDLYLVNKPIKDTSSISLSLFNPKITRDALPNTATDWSITKASTESPVSNGDSAEDVQSPSEEKESQSRPWEDWASEYDLSDGFNSTSFFRQRVSSLFDGKEELDLEQGQGDTRHPTAGVGVGDEQEGLNNKHSPLKNSNASPRKRRMSTRSHPSPTKSTTPTTTAGTHNLKGHGHGYGGGTNKNPIAIDESSSEDEEPLAVAALPSKRPRMTSTSTSASTTNTKSIKGTTTASTTSGKAPRKTTGGKGPAKTSATATARKSSTSGKSVKGSGSGSGSGTGGKAPKGRRKSSQVD
Length1820
PositionKinase
OrganismKwoniella dejecticola CBS 10117
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Tremellomycetes> Tremellales> Cryptococcaceae> Kwoniella.
Aromaticity0.06
Grand average of hydropathy-0.378
Instability index49.36
Isoelectric point8.34
Molecular weight201464.37
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08939
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     132.66|      24|      25|    1751|    1774|       1
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 1684- 1710 (32.48/16.39)	ST..........TPTTTAGTHNLKGHGHGYGGgtnKN
 1711- 1743 (24.75/10.60)	PIaidesssedeEPLAVAALPS.KRPRMTSTS...TS
 1751- 1774 (41.73/23.31)	SI..........KGTTTASTTSGKAPRKTTGG...KG
 1779- 1802 (33.69/17.29)	SA..........TATARKSSTSGKSVKGSGSG...SG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.24|      10|      29|     887|     896|       2
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  887-  896 (19.27/10.91)	KSTHALPPKL
  915-  924 (16.97/ 8.61)	ESAVALAPKL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     107.30|      29|      29|    1317|    1345|       3
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 1233- 1265 (20.73/ 9.76)	.......NAED.ALQARHI.LNrqviatldraATADDT.....DLLC
 1279- 1305 (25.91/14.40)	ILVVG.IDRLS.SLLSQAIgAE..........NQHHLE.....D...
 1317- 1344 (40.03/27.05)	.LHST.FNTSD.SLSDSSI.LN..........ARHKLL.....DLLT
 1345- 1375 (20.64/ 9.68)	V....aLQSIDrGLSDTDL.V...........IHHDISppqpgDLLR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.25|      15|      25|    1598|    1617|       5
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 1598- 1612 (28.63/25.45)	DWASEYDLSDGFNST
 1624- 1638 (26.62/ 9.88)	DGKEELDLEQGQGDT
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.89|      25|      27|     423|     449|       7
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  423-  449 (36.77/26.78)	CEKLKEVRASPASSTLGKveDMLIAIV
  453-  477 (44.11/26.33)	CESDEDVLLSPTTWKLHS..NILSATV
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     207.40|      55|      83|    1454|    1511|       9
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 1387- 1434 (66.21/43.60)	......LSVI.DNASPT...APKpNFPNLAV.WFFKIML.TCQN...............VLDADAANMM.........SDMLSY
 1454- 1511 (88.71/73.51)	ETNSsaLQDI.LSASPI...LAR.SLPHLSP.IRRNMALvTPDNG.D..........EIVNGVDSAIHM.........DDKKWE
 1522- 1597 (52.47/33.17)	EPYH...QDLyLVNKPIkdtSSI.SLSLFNPkITRD.AL..PNTAtDwsitkastesPVSNG.DSAEDVqspseekesQSRPWE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.69|      11|      26|    1010|    1020|      11
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 1010- 1020 (18.12/11.15)	LVLVVNRHLSS
 1038- 1048 (18.58/11.66)	IVLTPRKRLSS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.09|      20|      21|     928|     947|      12
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  928-  947 (39.90/23.29)	HGSFDNWRHQWWKIIIEILQ
  952-  971 (33.19/18.27)	HLAYDAVLRTVTSHIITVMQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.00|      13|      26|    1083|    1095|      14
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 1083- 1095 (22.70/16.12)	LIVLAYRQAVFCG
 1107- 1119 (20.30/13.57)	LLVVLQKSALLPG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.27|      20|      24|     703|     726|      15
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  703-  726 (26.57/33.36)	SmlmEQFKDeVMEY.IPEVFGLEQY
  729-  749 (31.70/21.85)	S...EALRN.VIDYqVPCSSRMSRY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08939 with Med12 domain of Kingdom Fungi
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