<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08879
Description |
Mediator of RNA polymerase II transcription subunit 12 |
Sequence | MGGFLLGFGSEVLESRRQPQLAPYKLKCEKEPLNSRLGPPDFYPQTPTCPEETLTREYLQSGYKESVEGIEEVREIILSQVGYFIKPEVTLRCKEAIRKRFRAINESRAQKRKVDTSIVLSSRQLIYNAGQVYGVPLSGSLLIKPGVFPEQRPCGEDFRRKWIEALSQQHKRLRSLSEHVPHGYRRKSLFDVLIRHNVPLLRATWFIKVSYLNQVRPASTSVSSGAPDKAQATRTEQWTKDITDYLQQLLDEFLSKDGSAVPLSGRDQSSPGLMGQPPSAKHRAESSPVISEVEDTSFLFRWWYVVRLLQWHFAEGLVLPSLVIEWVFAQLQEKDSVDALELLLPIVLSMIESISLSQTYARTFVEITIRNLSDLSSGNLSLISSSKKTSVASTLVEMLRYMILSVPDTFVSLDCFPLPSHVAPDIYGRSNIEAVHFETRDAYVRYLSCGHAVSCIQRRASNLGKIVSPNLQGSSAAKVVQTLDKALTMGSMTLAYSSLFEDLSDPAMEERWIAEVSPCLRASLMWIGTIELSLICSIFFLCEWATCDYRDTRTTPSQNVKFTGRKDFSQIYVAVLLLKNKVQEMHSQLTSKNSAPLVIRNSGRSASLNDTSLQAAVVENPSFIRSCTKILDEKRINKKDIFQSPGPFHDIIVCWLDQHEICDSGGLKRVEVLILELIRSGIFHPQVYVRQLIVSGIMDRNDTQLDLERKRRHHKILKQLPASCLFDILEEARIAEAQLLHEVVAVYSTERRLVLRELSDGQSNYVSNRSERNSSGQKQNDHQAGTRDVKHGRTKEQVAQVKTLISNLLRFPYSSSLPIEARSDESKGSVKRPINSSDIKVDFAEGRPGCEECKGSKRQKLDERSSFQGILLNQSDDEDSWWVRKGPKFPESFKVEPPQKTTKQSSRGRQKIVRKTQSLAQLAAARIESSQGASTSHVCDNKVSCPHHKSVGEGEISKDFERGKVQSPVDVGKAIKRLRMVEKRSVALWLLKSVRQLVEGNEKAASKASVTSVFSASTDDRNAVRWRLGEDELLSVLYIFDICCDFVSAVRFLIWLLAKTLSGVSNPTQVGRNIMLPKNRESLICHVGEAFLLSSLQRYENVLVATDLLPEALTAIMPKSTNMIVGRVYGSVAFSYGRNLLKKYKDLVSVVRWEKNYRASGDQKLLAELDAGRSVDGDSVFSSGASAGGEEIDEHIRQKLSGRMPRTVTNMKEIVQRHVEEALHHFYGKERKNIATAPRTPPEKWEDSYQIAHDIVMGLLDCIRQNAGATPDGDPSVVASAVAAIVGNVGLAVAKLPDFSCSNYQNLPSSIKNSLNCARHILSIHIVSLCLLKEALGERYSRIIEIALAVEASSAVSVAFAPPRGHRSQFQVSPEAHDIYGNHSSEVLNNSQKGFGGRATKAAAAVSALVVGALIHGIISLERMIVVFKLKEGLDILQFMRNARSSSNGMSRSVGTFKPENCIELYVHWFRLLVGNCRTVLDGLVGEILGESYILALSRIQRMLPLSLVFPPAYAIFGMVIWRPYILNSNVIMREDIPVYQYLSLAIGEAIRHQPFRDVCFRNSYTFYDLLANDIGDSEFAAMLELQSPDKHLKTMAFIPLRARLFLNALIDCKMPASTIMKEDGSWVSESGELRSNTESEAKLLERLLQILDTLQPAKFHWQWVELRLLLNEQALVEKIETQNMSFVDAIRSLSPNAENFALTESEKRFTEIVLSRILVRPDAAPLYSEVVHLIGKLLQESLVMDTKWFLAGHDVLLGRKSIRQQLLFVAQRKGLPTKAQFWKPWGWSSLGEAVANRGEKRKLEAIAIEEGEVVDECIDHKKLGKMNSQTVDSEGVGSIYQHITEKAFAELILPCIDRSSSELRNLFATELIKQMGVIEQHISTITRNGMKQAGVASVGVEGTSNKANSRKGMRGGGSPVLGRRPTAVSDSVPPSAVALRASLSLRLQFLIRLLPVIFADREPSARNMRQALASIILRLLGSRVVYEDADLSLPPPNPSALKWDAESSMDACVTSLFDRPGESLFERLLSIFHALLSSCKPSWLKPKSAPKSTVKSPRDFPAFDREAAESIQMLQSDLDRMELPLTIKRRIQSAMPFLPPSLPSSIPCHPPILPPSALSPLQSTMLAPAPQQRTAQASRVPTNLSGRSKALPSLDPDMEIDPWTLLEDGTVSASTSSSGGNGSMGGVSVDHANFKACSWLKGAIRVRRTDLTYTGALDDDS |
Length | 2222 |
Position | Kinase |
Organism | Ananas comosus (Pineapple) (Ananas ananas) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Bromeliaceae>
Bromelioideae> Ananas.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.208 |
Instability index | 54.04 |
Isoelectric point | 8.83 |
Molecular weight | 247441.03 |
Publications | PubMed=27374615
|
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of development, heterochronic GO:0040034 IEA:EnsemblPlants
regulation of radial pattern formation GO:0090213 IEA:EnsemblPlants
regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP08879
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 202.77| 52| 123| 1234| 1290| 1
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1152- 1187 (39.42/19.24) ..........RWEKNYRA...SGDqKLLAELD.....AGRSVDGD.SVFSSGASA......
1234- 1290 (83.28/67.80) IATAprtPPEKWEDSYQI...AHD.IVMGLLDCIRQNAGATPDGDPSVVASAVAAIVgnVG
1358- 1412 (80.06/50.51) VAFA...PPRGHRSQFQVspeAHD.IYGNHSSEVLNNSQKGFGGRATKAAAAVSALV..VG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 130.96| 41| 123| 831| 872| 2
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831- 872 (67.10/50.25) KRPINSSDIKVDFAEGR...PgCEECKGSKRQKLDERSSFQGILL
948- 991 (63.85/42.39) HKSVGEGEISKDFERGKvqsP.VDVGKAIKRLRMVEKRSVALWLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 83.32| 23| 123| 135| 159| 3
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135- 159 (39.33/25.09) VPLSGSLLIKPGVFPEqrPCGEDFR
261- 283 (43.99/22.49) VPLSGRDQSSPGLMGQ..PPSAKHR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 113.99| 35| 123| 399| 481| 5
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356- 390 (55.21/100.93) LSQTYARTFVEITIRNLSDLSSGNLSLISSSKKTS
447- 481 (58.78/18.63) LSCGHAVSCIQRRASNLGKIVSPNLQGSSAAKVVQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.96| 27| 87| 1113| 1139| 9
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1113- 1139 (49.66/31.52) LTAIMPKS.TNM..IVGR.VYGSVAFSYGRN
1200- 1230 (37.31/21.88) LSGRMPRTvTNMkeIVQRhVEEALHHFYGKE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 149.59| 47| 103| 1953| 2002| 14
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1953- 2002 (70.60/45.01) RLLPVIfaDRE..PSARNMRQALASIILRLLGSRVVyEDADLSLPPPNPSAL
2059- 2107 (78.98/40.63) RDFPAF..DREaaESIQMLQSDLDRMELPLTIKRRI.QSAMPFLPPSLPSSI
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