<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08865
Description |
Mediator of RNA polymerase II transcription subunit 33A |
Sequence | MAAAAAAWGAAAAEETKAAQEEGREPGLWAARVGAGMAAAGAALPHSPELAQLLAAHLGGGGGANAANPLAWKYAERALSSALASPLLLLSLLSTRVIRSRRLKPTAYRLYMELLRRHGFSFASQIKGPNFKRTMMLVDDNLQLSKIFGFQAYEPGVFIVAYVTCTLWQLLDAALDDEDLLELTPEKKAKWPTKPQDVSIIGERISNEPRVEHSEKLHKMNTKISVEIIGHFLRHKVISRLLCLARENMPSQWGSFASRLHLLATKSSALRNSTVSVQLFQRLIAGDWNILGKECKQNRKLEVRSLISFGSRTLGGYCLGASPSALWIPIDLYLEDCIDGSVAATNSIELLSGLVKTLQAVNGSTWHDAFLALWMASLRLVQRERDPHEGPVPRLDARLSMLLSITTLSIADIIEEDEALVDGMEVDSQLKDKAAGGKRCKDLVSSLQTLGDYESLLAPPPSIISAANQAAAKALMFVSGINVGGGYTENININDKALNCPGNLRHLIVEACISRNLLDTSAYFWPGYIAGRINQIPHSISSQLPGWSSFMKGAPLSQSMVNALVSNPAASLAELEKIFEIAINGSDDDKVSAATVLCGASLLRGWNIQEHTVRLVVKLLSPPVPPDYTGSDSHLINHGPMLNVLLTGISSVDCVQVFSFHGLVPALAAALMAICEVFGSCFPSVSRTLATGEEITAHAVFSNAFILLLRLWKFNHPPLEYCILGDGAPVGSQLTPEYLLLLRNARVLSPCKPAKNQAGHKAMSTDTSLPSPHPIFMDSFPKLKHWYRQHQACLASTLSGLVHGTPVHQNVDGLLRMMFRKINKGSNQSVGPVLSGSSSLSTSSGAGSDDTCVRPNLPAWDILEAVPFVVDAALAACSHGRLFPRELATGLKDLADFLPASLATIVSYFSAEVTRGVWKPAFMNGSDWPSPAANLSIVEEQIKKIVAATGGSFPATLPLPLAAFVSLTITYKLDKASERFLNLAGPALENLAASCPWPSMPIVAALWTQKVKRWSDFLVFSASRTVFHHNNDAVVQLLRSCFSATVGLSGTSSISGNGGIGSLLGHGFGSHFSGGLTPVAPGILYLRIYRCIKDVSILAEEILSLLMLSVKEIAETTVSKERSDRLKRTKHGMRYEQVSLAAAMTRVKVAAALGATFVWLSGGSRVVQSLIQEMLPSWFLSVHDLDQEGGSGPIVYMLGGYALAYFAVLSGMFAWGIDSTPVSKRRPRVVQSHFEFLASALDGKITLGCDWALWRAYVSGFLGLVVECAPSWVLEVGLDGLKRLSRGLRRWNEDELALALLRRGGVEAMGTAAELILAGE |
Length | 1320 |
Position | Tail |
Organism | Ananas comosus (Pineapple) (Ananas ananas) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Bromeliaceae>
Bromelioideae> Ananas.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.145 |
Instability index | 42.74 |
Isoelectric point | 8.20 |
Molecular weight | 142318.68 |
Publications | PubMed=27374615
|
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP08865
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 462.41| 147| 161| 997| 1155| 1
---------------------------------------------------------------------------
997- 1154 (223.14/151.83) WPS..MPIVAALWTQKVKRWsdFLvfSASRTVFHHNNDAVVQLLRS.CFSATVGLSGTSSIS.GNGGIGSLLGHGFGSHFSgGLTPVAPGILYLriyRCikDVSILAEEILSLLMLSVkEIAETTVSKERSDRLKRTKHGM.RYEQVSLAAAMTRVKVAAALG
1159- 1310 (239.27/129.21) WLSggSRVVQSLIQEMLPSW..FL..SVHDLDQEGGSGPIVYMLGGyALAYFAVLSGMFAWGiDSTPVSKRRPRVVQSHFE.FLASALDGKITL...GC..DWALWRAYVSGFLGLVV.ECAPSWVLEVGLDGLKRLSRGLrRWNEDELALALLRRGGVEAMG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 104.16| 31| 34| 1| 31| 2
---------------------------------------------------------------------------
1- 31 (54.53/25.99) MAAAAAAWGAAAAEETKAAQ....EEGREPGLWAA
33- 67 (49.63/23.04) VGAGMAAAGAALPHSPELAQllaaHLGGGGGANAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 64.68| 20| 32| 434| 453| 3
---------------------------------------------------------------------------
434- 453 (35.62/19.88) AAGGKRCKDL..VSSLQTLGDY
466- 487 (29.06/14.94) AANQAAAKALmfVSGINVGGGY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.46| 14| 34| 705| 718| 4
---------------------------------------------------------------------------
705- 718 (28.37/18.38) FILLLRLWKFNHP..P
738- 753 (20.09/10.62) YLLLLRNARVLSPckP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.78| 19| 36| 69| 87| 5
---------------------------------------------------------------------------
69- 87 (33.49/16.53) PLAWK.YAE..RALSSALASPL
105- 126 (27.29/12.34) PTAYRlYMEllRRHGFSFASQI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.22| 19| 36| 314| 334| 6
---------------------------------------------------------------------------
314- 334 (31.54/26.01) LGGY..CLGASPSALWipIDLYL
351- 371 (29.67/16.74) LSGLvkTLQAVNGSTW..HDAFL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 62.20| 19| 36| 233| 253| 7
---------------------------------------------------------------------------
233- 253 (29.89/26.67) LRHKVISrlLCLARENMPSQW
270- 288 (32.31/21.44) LRNSTVS..VQLFQRLIAGDW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 256.66| 72| 216| 630| 704| 9
---------------------------------------------------------------------------
544- 600 (67.17/57.71) ...................LP..GWSSFM.KGA....PLS.QSMVNALvsnpAASLAELEKIF.....EIAINGSDDDKVSAATVLCGA
630- 704 (122.47/129.20) GSDSHLinhGPML...NVLLT..GISSVD.CVQ....VFSFHGLVPAL....AAALMAICEVFGSCFPSVSRTLATGEEITAHAVFSNA
825- 890 (67.02/58.81) GSNQSV...GPVLsgsSSLSTssGAGSDDtCVRpnlpAWDILEAVPFV....VDAALAACS.HGRLFP...RELATG............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 102.50| 29| 29| 760| 788| 12
---------------------------------------------------------------------------
760- 788 (56.01/35.35) HKA..MSTDTSLPSPHPIFMDSFPKLKHWYR
790- 820 (46.49/28.03) HQAclASTLSGLVHGTPVHQNVDGLLRMMFR
---------------------------------------------------------------------------
|