<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08845

Description Uncharacterized protein
SequenceMDPHSIKRPRIMPPEAKSLQIPANLALPQQHASTLKSNSATLHQVPDLSFAPRSGVNTSTVGLNASSTVLPNFISGSSNRSLLNIPEHQGGPTRRNSYSNRHAKDTLFHKETHHYPGISKQQQIQLERQKKVHQQAQLQQAHQEFHRQRELYQMQQQQQQQQQQQQQQQQQQQQQQRLSTAPATSVASQPQGSLQPSRTPHAQHHHHHHHHHHFHVHPLMANSSNIQQQLNLTIPSSAHNQRTIASIPTSSSSSSSPYPSPSSSVATHLSSSNTSAASPGATSGSPRMTSSSLHHHHHHHHTSFHQHLPPQRPNQFSEWTNVKEKERARLLSNMARVRETQPPVPSAEAAKENLKRLSQRLHQRRTRARETILYDLHQGVKTVEAQVHKQVDMVLSRLKDTPGSKYAFALTHTFLTQIPQALSNTILPSAISAVADTVAGRTTNSLTTLRGRAGLDEFDEDDEDDLDDEDDLDDLDDIEELSYQQQLALLRSHQLQDSSLSHQLSSEFGTIALASSSSSSTSCSGSCSSGSSSATETSAASGIHHHSGDESVSECYGEGTKSSAPVSISREGASEFLSASTHHNYSIAASQVLNAALPSFIPSMVAPIVCVFSYPSPPATKPNTPQQSTPSSPSLLNMTKDNHNAASGTGSGSLQELGTLPLKLEHTVIKQEPVDEDMRLREKIKIDPGIIVVNSNAWTSAEREALFLAATRFRLYGQWSKIRQMMGLHRTDKEIEDEYQRLYGEEDEEMQSDDDADEDLVPIKQESDVEDDGDADDEAEPAVFIRFGGQRRATTPHQHSYSPATQQRQEHQFTPTSEGSVLLDIQPLPTVPTTANTTTSSTRPSHRHTHGHHTRSDRGGHGHGHHRHYDRLLKALNEKPLRIVKKEVMIDKRFALEDIPMRI
Length903
PositionTail
OrganismMortierella elongata AG-77
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mortierellomycotina> Mortierellomycetes> Mortierellales> Mortierellaceae> Linnemannia.
Aromaticity0.04
Grand average of hydropathy-0.833
Instability index55.78
Isoelectric point6.54
Molecular weight100174.10
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08845
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     222.73|      45|      89|     178|     222|       1
---------------------------------------------------------------------------
  111-  140 (31.24/10.17)	ETHHY...P......................................giSKQQQI...QLERQKKVH.QQAQLQQ
  141-  209 (64.94/30.23)	AHQEFHRQRELYQmqqqqqqqqqqqqqqqqqqqqqqrLSTAP.ATSV..ASQPQG...SLQPSRTPHAQHHHHHH
  210-  268 (41.26/16.13)	HHHHFHVHPLMAN...ssniqqqlnltipssahnqrtIASIPtSSSS..SSSPYP...SPSSSVATH........
  271-  299 (34.96/12.39)	........................................SS.NTSA..ASPGAT...SGSPRMTSSSLHHHHHH
  504-  545 (50.33/21.53)	LSSEF......GT........................IALAS.SSSS..STSCSGscsSGSSSATETSAASGIHH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.09|      16|      16|     620|     635|       2
---------------------------------------------------------------------------
  620-  635 (31.08/21.08)	TKPNTPQQSTPSSPSL
  639-  654 (28.01/18.00)	TKDNHNAASGTGSGSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.15|       9|      15|     846|     855|       4
---------------------------------------------------------------------------
  846-  855 (16.33/10.35)	HRHtHGHHTR
  863-  871 (20.82/ 9.09)	HGH.HRHYDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      70.01|      16|      16|     747|     762|       5
---------------------------------------------------------------------------
  463-  474 (15.00/ 6.63)	EDDLDDEDDLDD....
  747-  762 (27.69/18.67)	DEEMQSDDDADEDLVP
  766-  781 (27.32/18.33)	ESDVEDDGDADDEAEP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.80|      18|      23|      20|      40|       7
---------------------------------------------------------------------------
   20-   38 (27.65/24.55)	QIPaNLAL.PQQ..HASTLKSN
   44-   64 (23.15/ 7.93)	QVP.DLSFaPRSgvNTSTVGLN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.80|      13|     216|      88|     100|      10
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   88-  100 (26.25/12.61)	HQG.GPTRRNSYSN
  305-  318 (23.56/10.58)	HQHlPPQRPNQFSE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.41|      15|     168|     424|     438|      12
---------------------------------------------------------------------------
  424-  438 (26.60/18.04)	NTILPSAI.SAVADTV
  594-  609 (23.81/15.35)	NAALPSFIpSMVAPIV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08845 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ATETSAASGIHHHSGDESVSECYGEGTKSSA
2) KEIEDEYQRLYGEEDEEMQSDDDADEDLVPIKQESDVEDDGDADDEAEPAVFIRFGGQRRATTPHQHSYSPATQQRQEHQFTPTSEGSVLLDIQPLPTVPTTANTTTSSTRPSHRHTHGHHTRSDRGGHGHGHHRHYDRLLKALN
3) LRGRAGLDEFDEDDEDDLDDEDDLDDLDDI
4) MDPHSIKRPRIMPPEAKSLQIPANLALPQQHASTLKSNSATLHQVPDLSFAPRSGVNTSTVGLNASSTVLPNFISGSSNRSLLNIPEHQGGPTRRNSYSNRHAKDTLFHKETHHYPGISKQQQIQLERQKKVHQQAQLQQAHQEFHRQRELYQMQQQQQQQQQQQQQQQQQQQQQQRLSTAPATSVASQPQGSLQPSRTPHAQHHHHHHHHHHFHVHPLMANSSNIQQQLNLTIPSSAHNQRTIASIPTSSSSSSSPYPSPSSSVATHLSSSNTSAASPGATSGSPRMTSSSLHHHHHHHHTSFHQHLPPQRPNQFSEWTNVKEK
5) RARLLSNMARVRETQPPVPSAEAAKENLKRLSQRLHQRRTRARETILYD
6) SPPATKPNTPQQSTPSSPSLLNMTKDNHNAASGTGSGSLQEL
534
733
449
1
327
616
564
877
478
325
375
657










Molecular Recognition Features






MoRF SequenceStartStop




1) MDPHSIKRPRIMPPE
1
15