<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08840

Description Uncharacterized protein
SequenceMQNQQQQQQAQQQRQQLLLLQQQQQQLQQQQQQQMQQQQQHLQLQQQQQLQLQQQQQQQQQQDQQQVQQQAQLNLGWRTTLSNEDRLNLIKRLSDSLKALSPTIADAKIVELAKTFENVTYQRSPNKSEYLKAYSRKLQQIRFQITEQQQAAGGSPIVGSPQSQVAMASTPTLIQQSIPQGATVTPQQQQAIHMMQQRMFQQQQQQQQQQQQQQQQQQQQQQQQVPQSQQQQQIPQSQQLQQQLVPQQPQQQQQQQVPQQQSPFQQQQQQMFKQQGVPYQQQQQQQPPQQQQQQQQQQQQQQQVPTQPQQQQPQQQQPPPTQQQQQQSTQPQQQQQLQHLLHTQQAKLIQQQQLQQQQLQQSPQSQALSAAPSNGMVPQANAQMQVNQATPQQRPIQATVPGRNDPLLMLHQHNQKVQQDRQAQAQAQISLLQQQQQQHHQLQQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQQAQQQAQAQQQAQAQQQQQQQQQMQQHNAQLFQQQHQQQQQQHVQQQQQQASQSNVIPGGLQTQTVTTSNQDATHTMPPQGLVHNSLPNPGQPGATPARMPITNASRIQAAAAVQSMVERIQTSRAPPAILGDLTPEQKQSVKEQMNLMMPMFMKLDQLMPFFFALTGNRDATARLILMKYMFQDQLDSLQHEQYTITPENLGRLKDRLQHYFMWVKTEMANPAGNAAQVPGNVAHMAQPSALNAAPTQPANSGAMEGLNASVAADVAGVNGIGSTTTTTFTSAPTDPAPIPANHSAPALATAPAAPPSAQAVPGMVVKVGLTPADLKLPPPRKTNNSPPNSSFPGSPRSEAGTPSTPNLSLARPGATGNNQGSAPKHGKAAPSAPAAPLVEQQPSSTLGAQETVSPTISKAADGSSMTSSQLLLKTRQLQQQQALIQQQQKQQQQQQQQQQQQQQLQQQQQQMLQQQQHQVPQITQSQQIQQHSQQVVPQQPVQSTTPQQQPSPLSLSANSPARQVATPLESLSKEDLIRQFQVFKAALSGAAAGNAPILPNQAMMVRVQLQRIQAELAKPHRQEQMPRLGDGVPSSNGVAGNQGASTVLTTATVSPGDHQFSGTSAPTQTAAADLGPQIRELQMQENKVGPSQPSDPLEFLTVSYKSLARVDDAGPLQDGAGDSSPIFRNAFEGFVGKRVGNGPGKDMFGDGSQKRRRVSTTDGTLLSAMLLCRNGEPDAFMASYGDWAQHIPALSPSM
Length1281
PositionTail
OrganismMortierella elongata AG-77
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mortierellomycotina> Mortierellomycetes> Mortierellales> Mortierellaceae> Linnemannia.
Aromaticity0.03
Grand average of hydropathy-1.050
Instability index85.00
Isoelectric point9.62
Molecular weight142202.62
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08840
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     510.08|      74|      79|     175|     253|       7
---------------------------------------------------------------------------
   34-  112 (81.46/ 8.14)	..QMQQQQQHL.QL.........QQ.....QQ....QlqlQQQQQQ..QQQQDQQQV..........QQQ..........AQL...NLGwrttlsnedrlnliKRLSDSLKA..LSPT.IA.DAKIVEL
  182-  257 (137.87/22.71)	ATVTPQQQQAI.HMMQQ...RMFQQqqqqqQQ....Q...QQQQQQ..QQQQQQQQVPQS.......QQQ..........QQI...PQS..............QQLQQQLVP..QQPQQQQ.QQQV...
  258-  327 (108.87/15.22)	....PQQQSPF.QQQQQ...QMFK......QQgvpyQ...QQQQQQppQQQQQQQQ..QQ.......QQQ..........QQVptqPQQ..............QQPQQQ.....QPPPTQQ.QQ...QQ
  328-  393 (99.79/12.88)	ST.QPQQQQQLqHLLHT......Q......QA....K...LIQQQQ..LQQQQLQQSPQS.......QAL..........SAA...P...................SNGMVP..QANAQMQvNQATPQQ
  542-  622 (82.09/ 8.31)	AQAQQQQQQQ..QQMQQhnaQLFQ......QQ....H...QQQQQQ..HVQQQQQQASQSnvipgglQTQtvttsnqdatHTM...P...................PQGLVHnsLPNPGQ.........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     187.35|      38|      40|     780|     817|      11
---------------------------------------------------------------------------
  764-  796 (52.91/21.95)	VAH.M.....AQPSAL................NAAPTQ....PA......NS....GAMEGLNASV..AAD
  797-  837 (55.56/23.43)	VAG.VNGIGSTTTTTF................TSAPTDpapiPA......NH....SA.PALATAP..AAP
  843-  895 (38.17/13.67)	VPGmVVKVGLTPADLKlppprktnnsppnssfPGSPRS....EA......GT....PSTPNL..SL..ARP
  896-  944 (40.71/15.10)	GAT.GNNQGSAPKHG.................KAAPSA....PAaplveqQPsstlGAQETVSPTIskAAD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     111.52|      25|      26|    1183|    1207|      13
---------------------------------------------------------------------------
 1134- 1158 (36.30/23.71)	ATVSPGDHQ..FSGTSAPTQTAAADLG
 1183- 1207 (40.52/27.67)	LTVSYKSLA..RVDDAGPLQDGAGDSS
 1210- 1235 (34.70/22.21)	FRNAFEGFVgkRVGN.GPGKDMFGDGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.28|      24|      46|    1054|    1077|      15
---------------------------------------------------------------------------
 1054- 1077 (40.23/27.20)	LSKEDL.IR.QFQVFKAAL..................SGAAAGN
 1081- 1124 (22.05/10.76)	LPNQAMmVRvQLQRIQAELakphrqeqmprlgdgvpsSNGVAGN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     110.29|      29|      30|     682|     711|      17
---------------------------------------------------------------------------
  678-  706 (42.13/28.76)	.LMMP.MFM.KLDQLMPFFFA..LTGNrDATARL
  707-  735 (43.31/24.82)	ILMKY.MFQdQLDSLQHEQYT..ITP..ENLGRL
  738-  763 (24.85/10.30)	RLQHYfMWV.KTEMANPAGNAaqVPGN.......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      29.75|       9|     127|    1043|    1052|      22
---------------------------------------------------------------------------
 1023- 1031 (17.98/ 6.38)	PV.QSTTPQQ
 1043- 1052 (11.77/ 6.14)	PArQVATPLE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08840 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ASTPTLIQQSIPQGATVTPQQQQAIHMMQQR
2) DVAGVNGIGSTTTTTFTSAPTDPAPIPANHSAPALATAPAAPPSAQAVPGMVVKVGLTPADLKLPPPRKTNNSPPNSSFPGSPRSEAGTPSTPNLSLARPGATGNNQGSAPKHGKAAPSAPAAPLVEQQPSSTLGAQETVSPTISKAADGSSMTSSQLLLKTRQLQQQQALIQQQQKQQQQQQQQQQQQQQLQQQQQQMLQQQQHQVPQITQSQQIQQHSQQVVPQQPVQSTTPQQQPSPLSLSANSPARQVATPLES
3) GNAAQVPGNVAHMAQPSALNAAPTQPANSGAMEGLNA
4) LQQSPQSQALSAAPSNGMVPQANAQMQVNQATPQQRPIQATVPGRNDPLLMLHQHNQKVQQDRQA
5) QLQRIQAELAKPHRQEQMPRLGDGVPSSNGVAGNQGASTVLTTATVSPGDHQFSGTSAPTQTAAADLGPQIRELQMQENKVGPSQPSDP
6) QQAQAQQQQQQQQQMQQHNAQLFQQQHQQQQQQHVQQQQQQASQSNVIPGGLQTQTVTTSNQDATHTMPPQGLVHNSLPNPGQPGATPARMPITNASRIQ
7) QQVPTQPQQQQPQQQQPPPTQQQQQQSTQPQQQQQLQHLL
168
796
755
359
1091
540
302
198
1053
791
423
1179
639
341










Molecular Recognition Features






MoRF SequenceStartStop




NANANA