<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08834
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAGTHLLHNSTNGTLHQPTLTEPTMEPNGITKGALPPVPAPTPAPALVSAPMPISAPPPATVPVLPDNMNAMVPLGAVIHRMTNDAFAELSNLSETLPSMSDTDRKIELLKYTLSKREQFIKLLVLTKWGKNARKFQQCQNIVGFLQHENELFTRAVGGLFETYKMFGRARVRNFDIPTAIDVLTTGSYQRLPSRIKQAYVEDDKPTRTEIAATLEKLDDVIRMRLLCDELVPPAMKYTVGKGKAKFIVANEFEVTLTVSGPGSPKDVPWRIVGLKILAKPVGGSFQGLETSLTDGQMRAIIMFAQKELESVTTANAPHHPALPASEAVSLPANQALLRLYDYLHNLSLHLLIELVCTQAYQLSRSGWTDKLRLDVNQTRTVVRLVYWNSGFVPQAVQQQPAAPPPKRRASTTAAGQGKDTAQSLAAQQEHFLEIRIEERQGPTEPIPEGLAGALVDPKLLGYPKAYIKVVWSQVAKGIVPESQVASILELDPSQLNVERLLLKAVNMHTGQVMQGFYDRLWKYIESIKDKRETMEGTHFSKDDVKLEALDTGEQQSAAGTAGLPGPRALLVRLKGDRWIRIRIDVRTGRVVVREVGKTGEGDDSIIAAFQARLNENANNIVEALISLRFSMTIVELESIGILLGLQPYRRLALGKQDAAQFGNNIQQILFLQYPQHPRHYLVVGVIEQKFRVWLIEVAPADKEVAGIWLTLKSFEPVYLQGLKRRRREIDEGNSYNVALSKRKSVQFDLEDDGASDASSVEEMTIDQDVMTKLEALCRVRICLNETKNQLQELGIQYRPAAHASKDDGSSVSDPNMLPILRLDQNSISSGAADDMFEFVGAKLTGWWDSQRETWRVELLTLVSITMQRQGC |
Length | 872 |
Position | Tail |
Organism | Mortierella elongata AG-77 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mortierellomycotina>
Mortierellomycetes> Mortierellales> Mortierellaceae> Linnemannia.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.235 |
Instability index | 42.76 |
Isoelectric point | 7.26 |
Molecular weight | 96812.11 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP08834
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 120.35| 46| 174| 233| 283| 1
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233- 255 (21.15/12.63) ...........................PPAMKYTVGKGKAKFIVAnEFEV
258- 283 (25.85/15.45) TVSGPGSPkdVPWRIVGLKILAKPVG........................
439- 485 (73.35/40.04) ERQGPTEP..IPEGLAGALVDPKLLGyPKAYIKVVWSQVAKGIVP.ESQV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 137.46| 41| 321| 180| 221| 2
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180- 221 (63.40/54.37) AIDVLTTGSYQRLPSRIKQaYVEDDKPTRTEIAATLEKLDDV
505- 545 (74.06/58.67) AVNMHTGQVMQGFYDRLWK.YIESIKDKRETMEGTHFSKDDV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.37| 14| 16| 82| 97| 3
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82- 97 (19.20/20.78) MTN.DAFAELsnLSETL
100- 114 (20.17/13.16) MSDtDRKIEL..LKYTL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 162.59| 50| 481| 319| 373| 4
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319- 373 (82.08/64.95) HHPALPASE....AVSLPANQALLRL.YDYLHNLSLHLLIELVCTQAyqlsrSGWTDKLR
798- 852 (80.51/52.36) YRPAAHASKddgsSVSDPNMLPILRLdQNSISSGAADDMFEFVGAKL.....TGWWDSQR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.86| 13| 15| 23| 36| 6
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23- 36 (20.94/15.42) PTMEPnGITKGALP
41- 53 (23.92/12.63) PTPAP.ALVSAPMP
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