<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08831

Description Uncharacterized protein
SequenceMATVDLEKTLTSFLPPNLSVDGLYSSLRHGCRQRPIAWSCKNMAITPSWVPDRKVPGLMNPSLRFLSLLLTKEDKAQLWDTCIEDVSTYHGQSNITHVLWNHAGNHFVSIDEKGKIVIWANRRYLNAWLPVYVFVLFNPVVCCEWINPDRKYVAKTDGPTNTTKFERERTGRARGPLSLVLLSSDGQLTTVFKPAGQVFTHISTTIPRQSANEDITASRISHGSMMSSADGIHLVTHSNSILPSTVNLYNIDLRFSPEQTFRCDALAVLHLSNPLTGPGSVIMPNVVQHLQLLPSTPTRPFAVAVGLGSREELSSGEATYQCQVVVWEVASKVMGFHPAFQELSTRRNEVLSGHPSLTFVMLGERQFKDKFITALSYVPRSREVLVGFSDGSLLGLESRFPGLTDALPTLSDGFRREQDGSPLVAISASPNGFALNTLSLNGHISSSFTSETSGYDLELDVLVRHAVVALLNEWDYSDIVSIVVKAARVSSDNQLPDQFIEGVFKYYDSINGAEDSSVLEPFMPRASVLRRMLSLQLVLFQSIPRKLVQYRATSALLHLQSIGEVFLGCCTSDAATVAAHMEPGSNVATGQKPLAFNTDALWSLFPLCGWVLDFCTILFRELAVFLNRKTKQGPTSGVSHGAASGHNPGASTPAPSILCFLYHSRAKKTLRSVLILLEQFHAYVRVREQLYTNVVQTGGAIEAPIVPGQERFNNHTNSMSIPEAIAIKDINIAILSSHAEATFTRCPLKIGILKSMLRDLSGIGHHVDIARPNGINGAMHRTGENGILDKSASDHIVFIKGIVPSSSSASLAQSKTELKMITRRYSTVWDMNRLMFSTIHWLDIEPAQTLYSSRSGSGEKVTAMHPSRCRIDPANALKPRVISSINASPNLGRQQFPLLQHHPSNVSTISTGSRGSISGVSGRTGPVPMRVFTESPGEMPMSQQPIDPALRSMGHGLADNSSTMATAGSVHHGGSLDATTPSILGSRSIWGLTHEERDDDMEGPFNDSQDDELLSMRAIWNNWSAALQGQLRLQLDGRAADVGTEDDAMLEDDGDEDDEEGDSDEEMREYRNPVQRSNGGSRRSSLATLNSSSLWLLQESKSISMRTRSDWTLLPILADEGSEPYPPHVGTIAIGRLAMQGFEGKIEPMPVSSSPFEHGEASQGEIEAQVRKRRSGVDPIRKAKKYKSSGRSRQCIRCHQISTNMSANVKPGQRRPMSQPTAMGAGMNNNNNNNNSNNNNNNNNINIIPDIAASTLWYHNYDRSCICGGMWLEL
Length1274
PositionTail
OrganismMortierella elongata AG-77
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mortierellomycotina> Mortierellomycetes> Mortierellales> Mortierellaceae> Linnemannia.
Aromaticity0.07
Grand average of hydropathy-0.264
Instability index50.23
Isoelectric point6.65
Molecular weight139784.62
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08831
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      80.22|      17|      19|     375|     391|       1
---------------------------------------------------------------------------
  351-  370 (25.17/13.55)	L.SGHPSLTFVMLGerqFKDK
  375-  391 (29.86/17.54)	L.SYVPRSREVLVG...FSDG
  396-  413 (25.19/13.56)	LeSRFPGLTDALPT...LSDG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.43|      15|      15|     723|     737|       2
---------------------------------------------------------------------------
  723-  737 (23.46/16.46)	EAIAIK.DINIAILSS
  740-  755 (20.97/13.91)	EATFTRcPLKIGILKS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     386.05|     127|     273|     806|     960|       3
---------------------------------------------------------------------------
  806-  960 (179.71/184.64)	SSSASLAQsktELKMITRRYSTVWDMNRLMFSTihwlDIEPaqtlYSSRSGS...GEkvTAMHPSRCRIDPAnalkPrVISSI..NASPNLGRQQfPLLQHHPSNVSTISTGSRGSISGVSG...RTGPVPMRV.fteSPGE.MPMSQqpidPAlrSMGHGLADN
 1091- 1230 (206.34/132.34)	SSSLWLLQ...ESKSISMRTRSDWTLLPILADE....GSEP....YPPHVGTiaiGR..LAMQGFEGKIEPM....P.VSSSPfeHGEASQGEIE.AQVRKRRSGVDPIRKAKKYKSSGRSRqciRCHQISTNMsanvKPGQrRPMSQ....PT..AMGAGMNNN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.12|      17|      18|     524|     541|       4
---------------------------------------------------------------------------
  524-  541 (24.75/23.81)	PRASVLRRMLSlQLVLFQ
  544-  560 (29.37/22.45)	PRKLVQYRATS.ALLHLQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.10|      25|     245|     165|     192|       6
---------------------------------------------------------------------------
  165-  192 (38.91/35.44)	FERERTGrarGPL..........SLVLLSSDGQLTTVF
  414-  448 (37.19/24.52)	FRREQDG...SPLvaisaspngfALNTLSLNGHISSSF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.91|      13|      94|      42|      54|       8
---------------------------------------------------------------------------
   42-   54 (26.57/19.05)	NMAITPSWV.PDRK
  138-  151 (24.34/16.69)	NPVVCCEWInPDRK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.51|      15|      18|     656|     670|       9
---------------------------------------------------------------------------
  656-  670 (27.11/20.65)	SILCFL..YHS..RAKKTL
  672-  690 (15.41/ 8.20)	SVLILLeqFHAyvRVREQL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08831 with Med16 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GRQQFPLLQHHPSNVSTISTGSRGSISGVSGRTGPVPMRVFTESPGEMPMSQQPIDPALRSMGHGLADNSSTMATAGSVHHGGSLDATTPSILGSRSIWGLTHEERDDDMEGPFNDSQDD
2) QISTNMSANVKPGQRRPMSQPTAMGAGMNNNNNNNNSNNNNNNNNIN
3) QLDGRAADVGTEDDAMLEDDGDEDDEEGDSDEEMREYRNPVQRSNGGSRRS
4) RLAMQGFEGKIEPMPVSSSPFEHGEASQGEIEAQVRKRRSGVDPIRKAKKY
892
1200
1034
1136
1011
1246
1084
1186










Molecular Recognition Features






MoRF SequenceStartStop




1) PIRKAKKYKSS
1179
1189