<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08750
Description |
Mediator of RNA polymerase II transcription subunit 26 |
Sequence | MRDTPMQRICSELTEKLLKSLDKEYNVVDIRAVVDVISTLEKTTVTKEVLEITRLGKHINELRRKTSNEALAKRAKDLVRRWRDMVLPTVHSTPSQPTLALNGAKEMALRNLKPQSPALRELKPHSPLSLKDATPLRVLSPALSVHSDHSRSPNASNNKQSITLTSNHRISSCSRNASPVLGTSNQNHVTEAVPRTHSSNKRLRKEESSKDQCQYYQSPHGTESTIEEVKKQRLNGENISGNLNSQVPSPTLKERISDCFAETSLETTNDESGPKKRGRKKGSKSAKRQSFLEDSVKEKLASISRNPKLKTTQELLADLQARGSNCSPIGSANALPSQSVAEPPSTEDVLRGSNNEQVFKHLRCSSQKNSQSLHRSGLPSSETSTGKTQKAARLRAAENCRESPSPESCHDRLREDDRISETIETSTCRSPLQRDLTVEEILAKLPPLDPSSIDWGEDEERDDAECFPPPRDATAEDLERLHMQCIEGLNGNFQPRLSMATACSDGDERSNARDGGNGVSSGLSNVDSVKSVHNNQTDNVEFREWHQMLARPSYQGEILNIMPYVIID |
Length | 568 |
Position | Unknown |
Organism | Atta colombica |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Hymenoptera> Apocrita> Aculeata> Formicoidea>
Formicidae> Myrmicinae> Atta.
|
Aromaticity | 0.02 |
Grand average of hydropathy | -0.855 |
Instability index | 63.39 |
Isoelectric point | 8.17 |
Molecular weight | 63081.72 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP08750
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 477.35| 122| 128| 58| 183| 1
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58- 179 (204.04/109.53) HINEL..RRKTSNEALAKR..AKDLVRRWRDMV.LPTVHSTPSQ.....PTL..ALNGA.KEMALRNLKPQ..SPALRELKPHSPLSLKD...ATPLRVLSPALSVHSDHSR...SPNASNNKQSITLTS.NHRIS...SCSRNASP
188- 307 (138.16/74.66) HVTEAvpRTHSSNKRLRKEesSKDQCQYYQS....P..HGTEST.ieevKKQ..RLNG...ENISGNLNSQvpSPTLKE.......RISDcfaETSLETTNDESGPKKRGRK...KGSKSAKRQSFLEDSvKEKLA...SISRN..P
308- 431 (135.16/71.14) .......KLKTTQELLA......DLQARGSNCSpIGSANALPSQsvaepPSTedVLRGSnNEQVFKHLRCS..SQKNSQSLHRSGLPSSE...TSTGKTQKAARLRAAENCRespSPESCHDR....LRE.DDRISetiETSTCRSP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.52| 17| 21| 446| 466| 2
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446- 466 (27.62/29.13) PPLDPSSidwgEDEERDDAEC
469- 485 (32.90/20.63) PPRDATA....EDLERLHMQC
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