<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08746
Description |
Mediator of RNA polymerase II transcription subunit 23 |
Sequence | MSSETQITNILNDILKVEAIEEAFSCVLVHHPKKETDKVAAWHQELRTAMTGLTKEQQEAAVRQFLSIAAAMTNHRRLQLLLSLLENLVHSNFLPARLVCECILSCDKLQYQLEDFWVECFVLIKHILGGVDYKGVREIMKGCKEKAQTIPARLDASVQPQLKALENVIEFIFDRNACLLPGYFIVNEIQKAYPDGKNWPHWKLAKLLSDFVESFRHTAQMVSIVGHSKMLPVVEHTGYADYLINPWLLDPTTLKFSLKGNLPYDPDLLKPQTELLRYVLEQPYSRDMVCSMLGLQKQHKQRCVVLEEQLVELVILAMERSENETLPAEGMDGTVANHWVWLHLSSQLIYFILFQFACFPSIVMAIHDKLAGRELRKGRDHLMWVLLQFISGSIQRNPLSNFLPVLKLYDLLYPEKEPLPVPDYTQALCTHQMAITCIWIHLLKKAQTEPGTNIHRPIPHTLKVHHEFLQHLVMPNASLCMGSDYRIALLCNAYSTNQEYFSRPMAALVDTILGTQKNQQQQPLQNLQNNAALANGPTTPLSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGIKGFISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAESEELNRALVLTLARSMHVTGTGADSLSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFFQQNSVAKENKQQIKKAVEEEYRNWASMNNENDIIAHFSVPGTPPLFLCLLWKMILETDRISPIAYKILERIGARALSAHLRKFCDYLVFEFANSVGGQHVNKCVDTINDMIWKYNIVTIDRLVLCLALRTQEGNEAQVCFFIIQLLLLKAAEFRNRVQEFVKENSPEHWKQSNWHEKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQNLPVYFGNVCLRFLPVFDIVVHRYLEIPPVIKSLEILLEHLGCLYKFHDRPVTYLYNTLHYYEKKLRDRPLLKRRLVSAVLGSLREIRAPGWALSEAYQMYMTRFNDDAVSWVPELDYYIRLVQRIVETMSGTAHFPATDWRFNEFPNPAAHALYVTCVELMALPVAPDAVANFLLDVVAKGYTVVPSDEIHLWINCVGLLLAALPECYWSALHKRLLETISSPGLVNWQYNNLTPFQMFNFNITHNSLLENKYSYMLALAHSVWHHAGVGQITTMPQFIKEKLQPVVSSEEQLIYACHLIGPTLARFNAERPHCVVELAVCLYEMLERVDHTQTTLNYMDSICDLLVSYFLMLCLSFYESFYIFLNNSDRYHIKYMFVGDMTKNEVECIIRRLRPALQMRLRFIAHINIDEIHTS |
Length | 1381 |
Position | Tail |
Organism | Atta colombica |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Hymenoptera> Apocrita> Aculeata> Formicoidea>
Formicidae> Myrmicinae> Atta.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.024 |
Instability index | 46.57 |
Isoelectric point | 6.68 |
Molecular weight | 158499.29 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP08746
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 111.73| 34| 148| 454| 495| 1
---------------------------------------------------------------------------
454- 495 (56.85/47.95) IHRPIPHTLKVH...........HEFLQHLVMPNaslcmgsdYRIALLCNAYS
603- 647 (54.88/30.57) ISQLLPTVFKSHawgtlytllemFSYRMHHIQPH........YRVQLLSHLHS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 465.71| 162| 260| 799| 1016| 2
---------------------------------------------------------------------------
799- 1004 (234.45/232.04) PGTPplfLCLLWKMIL...ETDRIS..P.IAY..KILERIgARALS..AHLrKFCDYLVFEFANSVGGQHVNKCVDTINDMIWK..............YNIVTIDRLVL...ClalrtqegneaqvcffiIQLLLLKAAE.....FRNRVQEFVkeNSPehwKQSNWHEKHLAFHRKFPEKFAPEGIME.QTS............GGPSQyqnlpvyfgnvcLRFLPVFdivVHRYLEipPVIKSLEILLE
1055- 1261 (231.25/147.88) PGWA...LSEAYQMYMtrfNDDAVSwvPeLDYyiRLVQRI.VETMSgtAHF.PATDWRFNEFPNPAAHALYVTCVELMALPVAPdavanflldvvakgYTVVPSDEIHLwinC.................VGLLLAALPEcywsaLHKRLLETI..SSP...GLVNWQYNNLTPFQMFNFNITHNSLLEnKYSymlalahsvwhhAGVGQ............ITTMPQF...IKEKLQ..PVVSSEEQLIY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 218.96| 68| 260| 8| 132| 3
---------------------------------------------------------------------------
52- 120 (115.50/141.67) GLTKEQQEAAVrQFLSIAAAMTNHRRLQLLLSLLENL.VHSNF.LPARLVCECI.LSCDKLQYQLEDFWVEC
514- 584 (103.46/51.19) GTQKNQQQQPL.QNLQNNAALANGPTTPLSMSILDSLtVHSKMsLIHSIVTHVIkLAQSKSNMALAPALVET
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 117.39| 31| 277| 387| 419| 4
---------------------------------------------------------------------------
254- 276 (33.94/19.44) LKFsLKGNLPYDP............DLLKPQTELL
387- 419 (51.48/41.03) LQF.ISGSIQRNP.LSNFLPVLKlyDLLYPEKEPL
675- 701 (31.98/17.84) ......GSAEVQPqLSRFLSEPK..TLVSAESEEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 74.12| 20| 277| 1008| 1028| 5
---------------------------------------------------------------------------
1008- 1028 (35.67/28.49) CLYKFHDRpVTYLYNTLHYYE
1287- 1306 (38.45/24.87) CLYEMLER.VDHTQTTLNYMD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 199.69| 60| 135| 187| 249| 7
---------------------------------------------------------------------------
187- 249 (102.06/67.84) NEIQKAYP.DGKNWPHWKLAKLLSDFVE.SFRHTAQMVSIVG..HSKMLPVVEHTGYaDYLInpWLL
323- 386 (97.63/55.30) NETLPAEGmDGTVANHWVWLHLSSQLIYfILFQFACFPSIVMaiHDKLAGRELRKGR.DHLM..WVL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 142.36| 45| 583| 126| 176| 8
---------------------------------------------------------------------------
126- 176 (72.63/58.65) HILG.GVDYkgvreiMKG..CKEKAQTIPARLDAS.VQPQLKALENVIEFIFDRN
714- 762 (69.73/44.04) HVTGtGADS......LSGtwCKELLNTIMQNTPHSwANHTLQCFPPVLSEFFQQN
---------------------------------------------------------------------------
|