<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08739

Description Uncharacterized protein
SequenceMDFEATKHNLLERMLLDASAKPTDLPLSLLKSITNGFSDDNRVGSGGFAVVYKAKLQNGEVAVKKLSQALDLDEKNFKKEVSCLMTVRHKNIVRFLGYCADTQGKISNYAGKMVMADERERLLCFEFVPNGNLERYIADASQGPEWSIRYQLIKGICEGLHYLHQNKILHLDLKPANVLIDHNMVPKIADFGLSRRFDENQSHAIASNLVGTTGYLAPEFYGREIRSELDIYSLGVIIIEMLTGRKGYFEIKNVLESWSGRFGTSQGDTRLEQVRVCAEIGLQCIDSDPRKRKTTRCILQKLDEMESRCGFILNGISTSPVTHEPVMISPNVSAPALSHITPISNVASEGVSALQTSSPYLIPQEANFANDTVQEHKPVKNPVQLPVRTGSHGSLNNLPQVHMSNTELNSIDLTNKSSMNMPIGQHPHAQQQPPNYVKIWQGTLSGRRRGERVHICHLEAYRRGTMPEIHVADWPEIMEISRMIDEKHMDIDYCEVADFLTFGVSKQHGFLGQLQEKKLCTVIILPSQTLLLKWSEKVGRLIGMLFPGDIEVLKTPISKSAASNISAAAAAAVLLHQQQQLLLQQQHMYMQQGLLHQPEMQPMKHQHESRRAAPAIAATADDAREILAEKGRAKVAKQDA
Length640
PositionUnknown
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Sorghinae> Sorghum.
Aromaticity0.06
Grand average of hydropathy-0.319
Instability index45.88
Isoelectric point7.35
Molecular weight71490.24
Publications
PubMed=19189423
PubMed=29161754

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08739
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.25|      10|      15|     238|     247|       1
---------------------------------------------------------------------------
  238-  247 (17.83/13.30)	IIEMLTGRKG
  254-  263 (19.42/15.22)	VLESWSGRFG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.36|      13|      16|     323|     338|       2
---------------------------------------------------------------------------
  311-  323 (21.58/ 6.78)	FILNGISTSPVTH
  327-  339 (22.78/16.31)	MISPNVSAPALSH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     214.42|      69|     212|     341|     416|       3
---------------------------------------------------------------------------
  341-  416 (102.93/89.43)	TPISNVASEGVSA.......LQTSSPYLIPQEANFANDTVQeHKPVKNPVQlpvrtGSHGSLNNLPQVHMSNTELNSIdLTNK
  555-  630 (111.49/75.24)	TPISKSAASNISAaaaaavlLHQQQQLLLQQQHMYMQQGLL.HQPEMQPMK.....HQHESRRAAPAIAATADDAREI.LAEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     146.70|      39|     121|       3|      43|       4
---------------------------------------------------------------------------
    3-   41 (65.20/36.99)	FEATKHNLLERMLLDASAKPT.DLPL..SLLKSITN.GFS...DDN
  125-  159 (47.37/24.07)	FEFVPNGNLERYIADASQGPEwSIRY..QLIKGICE.G........
  161-  200 (34.13/17.36)	.....HYLHQNKILHLDLKPA.NVLIdhNMVPKIADfGLSrrfDEN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.51|      15|      18|     266|     283|       5
---------------------------------------------------------------------------
  266-  283 (20.65/20.61)	QGDTRLEQVRVCAeigLQ
  286-  300 (26.86/16.71)	DSDPRKRKTTRCI...LQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08739 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QEANFANDTVQEHKPVKNPVQLPVRTGSHGSLNNLPQVHMSNTELNSIDLTNKSSMNMPIGQHPHAQQQ
364
432










Molecular Recognition Features






MoRF SequenceStartStop




1) DDAREILAEKGRAKVAKQ
621
638