Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MPGVIMDHGSRNGSHTNHDRDERHNGVNGIIYTSEKTQDKGKGRVEPQQNMTPISPTMPNGINGTFSDDPQHANGAGNGHDMQNRVDQLPPEILHITQGYMPLSGLLSRLAQHSNTALQATLTELAQMPLPASMTNGNTSHSSSTDDNSPENQAKKKRLLDFATNTHESWTKALVVTGWSRKADEVSRAVDIKVHVDQEKAFYTACIDELAFRRRSFSTDPKKRWPNPDLKTAVPVLTTGKAHWMPDLGYISQPPLTSKDVLQSLEKLNTLLSARLNLDDYDSIPLQFKDFTIKSGRATFKVEGEFELDVTIADEEPQSQFWFIDFRFLFWPSASILTPRARTFIESRVNEILLRDGLSGCYKFLHEMILTYKISEFRHQAIDLGRAKWVETLKVEALNRALSVQYWLDRYNGSGTKSWIILGVHSGKREDGRPDANSTSRLSLRWFRDHKEVKDADISFDTVNISTESLLRVVIAMHISHILTVIFDKLSAHTLYANRELGISLVTSPDDPSKPELEVSLTNERRLSLKIDPISGRFVFSPTMLMAHKYEVMMNAPSRDPKDSTGKRMEDTIDKALRVLENLRYSFITDDIVTRGVSLGWRRLPDPGIKRSVLFESIPKNTQMSLWLRRPGWAEDWYLLVCLSMSGANWFLIKLMRQATPLDPNPNALGIGPFLKVQIKTVSPTINYMFLTALNIYTGGLLSYYANLKTLHAKRVRQMLRQGPPSRSLTLPVIFVKISELLRDSPTMMNSKAFWAKKDVIKLTYKGVEVHAPSPNDINALSQTSITATQSSNATLIRRPTIMEEKAVLVTEARMIVPLPKNLAILNEKVDPDIAFHPTTGSFALRLYSKIGESVIPELIERITGIGRLVQFVDVLQKHEKTLKCESVSLGKIVFKYGQASSTQSDPSPATRPSLQYSATVDFSTGENTMTLILEKANPHLRIKNFLTNVLNSAEGLNGVATLLTLTLPLLRGLTAIEEAWNDSALYEKGEAFVTARATDWYNIRYNLRQPAAQNQTTPPRLRRVLFDLRLRQRRGEPWWHLHRTDNLRLKDWDNLDTALKPLWTTSGPGWRAMMSSAAGQGNGIEELLAKMDDVVRTFAMSDVGIQSQQAADVPAPIPKQAPTQAPPSRQPQQQRQQPTPSQSQSQSQDRGNPRHKVIEID |
Length | 1162 |
Position | Tail |
Organism | Phialocephala scopiformis |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes> Helotiales> Mollisiaceae> Phialocephala. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.419 |
Instability index | 48.57 |
Isoelectric point | 9.22 |
Molecular weight | 130751.65 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP08734 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 229.42| 71| 124| 939| 1020| 1 --------------------------------------------------------------------------- 939- 1020 (111.32/94.84) PHLRiknfltNVLNSAEGL.NGVATLLTLTLPLLRGLtaieeAWNDSALYEKGEAFVTARATDWYNIRY.NLRQPAAQNQTTPP 1069- 1141 (118.10/77.20) PGWR......AMMSSAAGQgNGIEELLAKMDDVVRTF.....AMSDVGIQSQQAADVPAPIPKQAPTQApPSRQPQQQRQQPTP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 765.24| 252| 363| 110| 389| 2 --------------------------------------------------------------------------- 110- 389 (375.74/264.94) LAQHSNTALQATLTELAQMPLPASMTNGNTSHSSSTDDNSPE...NQAKKKRL...LDFATNTHESWTKALVVTGWSRKADEVSRavDIKvhvDQEKAFYTACIDElAFR.....RRSFSTDpkkrwpnpDlktavpVLTTG.KAHW..MPDLGyISQPPL...TSKDVLQSL........EKLNTLLSARLNLDDYDSIPLQFKDFTIKSGRATFKVeGEFeLDVTIADEEPQSQFWFIDFRFLFwpSASILTPRA..RTFIESRVNEiLLRDGLSGcyKFLHEMILTYKISEFRHQAIDL..GRAKW 475- 755 (389.50/210.82) IAMHISHILTVIFDKLSAHTLYANRELGISLVTSPDDPSKPElevSLTNERRLslkIDPISGRFVFSPTMLMAHKYEVMMNAPSR..DPK...DSTGKRMEDTIDK.ALRvlenlRYSFITD........D......IVTRGvSLGWrrLPDPG.IKRSVLfesIPKNTQMSLwlrrpgwaEDWYLLVCLSMSGANWFLIKLMRQATPLDPNPNALGI.GPF.LKVQIKTVSPTINYMFLTALNIY..TGGLLSYYAnlKTLHAKRVRQ.MLRQGPPS..RSLTLPVIFVKISELLRDSPTMmnSKAFW --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 87.94| 25| 32| 25| 50| 3 --------------------------------------------------------------------------- 25- 50 (40.25/38.11) NGVNGiIYTSEKTQDKGKGRVEPQQN 60- 84 (47.69/39.55) NGING.TFSDDPQHANGAGNGHDMQN --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) IPKQAP 2) PRHKVIEI | 1118 1154 | 1123 1161 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab