<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08714
Description |
Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MASASGSPFALRPLPLTLRDRKPASLVDFIARVNADKGGFRNVTEESLREELEAEAEADDVVDSKEVDMLDGESEVDGDAEQIGVEDFHEAVNEIRQNAEIAHQNAMLTVDFISLVLSKEMPSQAGTTVSPALRDLVGLGTLGADKLATSNIDDERLRDNKLVATGCKFADINRTVESVLTSASRLQEEISIETKYWAEVLAVSDKGWSVTRVPDEPETLGVRYGFSEAAPDFRNTSLAPMRRGDDGTVELDCGRMLGDPQRLLVTLEKNGRIVGQSALARPLPQDAPLQDRVLEARNTIFAQELWHEINREGRLLQNYGVRLEDSAVSYSINDDLRVVFALQPLERLVEEGASELLPEDSRAESLAAALHQLLTYAHRINNQKRTRPMPKNRIQSTTTPPYPLLRPVLTNLQHEISTQDVTRFISDLTTVLQSAGVTTALFRLREPPISLNLAETRGSYSEGLIEALFGPLEIQYEMNITPEARLLIHCKSVMINAIATTYHIYLLPPAQGELNPLQFAYPPVHVHGEGYSLPELKYYIQQAVARALTERASKTLATITPSSPQREDVLQAQWVKHVSGIALENDNDPKERLSFDVVCANPGTSGVHPELRVHGSWAAAGQPMAATRTWAWTVDDAAQGWQKESVDQVVCDVVARMVQPSVGTSGFGMI |
Length | 670 |
Position | Head |
Organism | Valsa mali |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Sordariomycetidae> Diaporthales> Valsaceae> Valsa.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.288 |
Instability index | 42.54 |
Isoelectric point | 4.89 |
Molecular weight | 73836.34 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP08714
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 420.60| 106| 106| 180| 285| 1
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33- 149 (99.55/59.36) ......VNADKGGfRNVTE....ESLREELEA..eaeaddvvdskevdmLDGESEVDgdaEQI.....GV.E...DFH.E.....AVNEIRQN.AEIAHQNAMLTV...DFislVLSKEMPSQAGT.TVSPALR.DLVGLGTL..GADKLAT
153- 258 (148.28/92.07) DDERL.....RDN.KLVATgckfADINRTVES................vLTSASRLQ...EEI.....SI.E..TKYWAE...VLAVSDKGWSVTRVPDEPETLGV...RY...GFSEAAPDFRNT.SLAPMRR.GDDGTVEL..DCGRMLG
259- 365 (111.06/67.09) DPQRLLVTLEKNG.RIVGQ....SALARPLPQ................dAP....LQ...DRVlearnTIfA..QELWHE......INREGRLLQNYGVRLEDSAV...SY...SIND...DLRVVfALQPLERlVEEGASELlpEDSRAES
366- 462 (61.71/33.96) LAAALHQLLTYAH.RINNQ....KR.TRPMPKnriqstttppypllrpvLTN...LQ...HEI.....ST.QdvTRFISDlttVLQSAGVTTALFRLREPPISLNLaetRG...SYSE..................................
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