<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08697
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MTASKMPMMLEAHMDPLGGGLPNMDDDLFGDEVMPMASRPPSKQLHQRMDEMRGRGCCRSIACSKQGTIASISPDGTYINLQCPRTNPSDGTWELSEPTECSIFSAPLPGGPIVHLAWAPTNSPELAVVDAFGRVCLVTFPLTLNKPSFIARKWDSDAPDDLHSIVGCYWLPLYQARQYNITYGPAVRENEKYQYGNSVTAALGPWHPNPQKSSLVCVTANGFLKLFFSQNSNQVQDTQLEMESITSSDDLITHASICPDRGSQGKLLVVLATAARQLKVLQAEIQWGMTQRADKQIPPGSLPLNPSLKAERLVTTSWLQPGLVESHLDISMGQISHLEVLPPVTDMKTKTSLPATILTVRSHVPTPQTPYNIEYQSIIDRWNIVMDQPQQLHPAFEQRGSKAGSGLTPSPMTRLQKCDSIVINKVIVSVETTQLGKIICLGFSDGTLQYRDRVTMAEIYHEEHQNQIMTLQQAGFHFDEEKPCLQMAVSPNNCSFTQVCENGKLKWNSLKYTVAQIGSTRQDPLYESVLAGLTLAAANATHQNTNYDDILAVARPFVEKHPRFLTELVSTLVMMLNINVDYSEEAHHDQLVRNVQLQFVMSLLNHFGFRGEFKPRSFSSKFAMLGLNLRNIVILITVASNSPMNMAKEKWTPLDEAEVVDALAGCARWALDLLSWLADSLFALRDDPNFMELLNGSRFSEMTAYLKSKNDVSLHLLLCSSTRGFLSAACRRLNHLQTLSNKAIQYWERTSPNNATDSNATNRGITPVQQAYLKMQRYTTTTLIKVDEIDKLLSTLSGDIRHTYQASLASLAQKQQQQQQQQQPGKPNQLPPDTAVKKAQAHCELMMLLAENPPLSFLPLIKKLFETDLKNLMASTKRSDLFFTDFELLDVDDEPKRLAARKAERKYVDTFKRVELTAPKLPKAVNGDSVQTHESPSNGDGSGPAWRRCVRCCAVMEDVVGSKPGFTFVLSQQRKCSCGGNWGWVRW |
Length | 987 |
Position | Tail |
Organism | Valsa mali var. pyri |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Sordariomycetidae> Diaporthales> Valsaceae> Valsa.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.307 |
Instability index | 39.82 |
Isoelectric point | 6.77 |
Molecular weight | 110079.68 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP08697
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 412.31| 145| 514| 118| 309| 1
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118- 309 (192.86/253.89) WAPTNSPElaVVDAFGRvClVTFPLTLnkPSFIArkwDS.....DAPDDLhsivgcywlplyqarqyNITYGPAVRENEKY.QYGNSVTAALgpwhpnpqkssLVCVTANGFL..................KLFFSQNSNQ.............VQDTQLEMESITSSdDLITHASIcpDrgsqgKLLVVLATAARQlkVLQA...EIQWGMTQRADKQIP..PGSLPLNPSLK
651- 837 (219.45/153.44) WTPLDEAE..VVDALAG.C.ARWALDL..LSWLA...DSlfalrDDPNFM.................ELLNGSRFSEMTAYlKSKNDVSLHL...........LLCSSTRGFLsaacrrlnhlqtlsnkaiQYWERTSPNNatdsnatnrgitpVQQAYLKMQRYTTT.TLIKVDEI..D.....KLLSTLSGDIRH..TYQAslaSLAQKQQQQQQQQQPgkPNQLPPDTAVK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 96.02| 29| 835| 8| 38| 2
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8- 38 (47.97/45.46) MMLEAHMDPLgGGLPnMDDDLFGDEVMP.MAS
846- 875 (48.05/34.01) MMLLAENPPL.SFLP.LIKKLFETDLKNlMAS
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