<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08695

Description Telomere-associated protein 1
SequenceMATIEPRLMHLLNDSNSPETSAYPPPDLPPIQTFSSFAKSSNFSLPPLEPDAGHHGRNEQQQQQQQQQQQQQQQQQQSSSSRAPQHIPPLASITEEYNGRYHDGAGLRHTGGGISLRMLYDNPDVNESQLSLNHILDDVPEPAPLAEDATTKKRQRALTVKDDIMHLPQPLKKQKSAQNIVPPIINGLYEPPPNAAVFPPIALEDNDPATNINTFREFNNALINNTEPEVGEKVVAPPPMQDHTALPEPDKALPKVKRKAAKPRRKWSEEETKDLLLGVDKYGVGKWTSILEDPAYNFNGRTAGDLKDRFRTCCPDELRVSHSKSKESLQQEHSASAPPTETKSKGKSKTALLLEDILADPEEPELSAGKEDAQCTSSSPAQPNQQDSDSAAKPKKSRAHRKKLEDLQKMGIHGPFKKSHRRERRPFTQQDDDQILEGLRLYGPAWTKIQRDPRFDLSSRQPTDLRDRVRNKYPDTYKQIEERQIQAKDPGPSRTNSNLLEPSVNTMMNENSLMTLEPHLNRSGSREDMMVHKWSGAQTLPHASAAVNNSFAELPGLDAFTREQTLDGEVGDVGTEIMGIAAAAALEEYLKVNLGEARLSTDHNIT
Length606
PositionTail
OrganismValsa mali var. pyri
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Sordariomycetidae> Diaporthales> Valsaceae> Valsa.
Aromaticity0.05
Grand average of hydropathy-0.939
Instability index62.91
Isoelectric point5.89
Molecular weight67565.49
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08695
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      64.10|      15|      21|     324|     338|       1
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  324-  338 (25.31/15.39)	KSKESLQQEHSASAP
  347-  361 (21.26/11.74)	KSKTALLLEDILADP
  368-  381 (17.53/ 8.37)	AGKEDAQCTSSSPA.
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.29|      29|      43|     178|     209|       2
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  178-  209 (50.33/35.08)	QNIVPPIINGLYEPPPnaaVFPPIALEDNDPA
  224-  252 (53.97/30.61)	NNTEPEVGEKVVAPPP...MQDHTALPEPDKA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.96|      15|      23|     137|     157|       4
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  137-  157 (22.13/20.41)	DDVPE.PAPLaedattKKRQRA
  162-  177 (24.83/10.80)	DDIMHlPQPL......KKQKSA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.86|      18|      27|     407|     431|       5
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  407-  424 (34.43/30.25)	LQKMGIHGP.FKKSHRRER
  436-  454 (29.43/10.78)	LEGLRLYGPaWTKIQRDPR
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     288.07|      89|     466|      44|     134|       6
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   44-  134 (148.67/102.25)	SLPPLEPDAGHHGRNEQQQQQQQQQQQQQQQQQQSSSSRAPQhIPPLASITEE..YNGRYHD.GAGLRHTGGGISLRMlYDNPDVNESQLSLNH
  512-  603 (139.39/87.15)	SLMTLEPHLNRSGSREDMMVHKWSGAQTLPHASAAVNNSFAE.LPGLDAFTREqtLDGEVGDvGTEIMGIAAAAALEE.YLKVNLGEARLSTDH
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.32|      21|     157|     296|     316|      10
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  296-  316 (42.13/27.57)	YNFNGRTAGDLKDRFRTCCPD
  455-  475 (39.19/25.14)	FDLSSRQPTDLRDRVRNKYPD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08695 with Med15 domain of Kingdom Fungi
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