<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08605

Description Uncharacterized protein
SequenceLKGIKHFWKHKNDEDKESVLLQNSILFSHPTFLLLLHVCLPDADFVVDSLYEQIEYFVLNARDIADRVPDNLHTRQIVQQCLKYRLILAGQKFKYIQSDLDMCTRWATLLAQLISHGVTEPESNCSLFYMIYDMLQMLIHSLAARSGIEGKHYQAVAKKIRRELSERPPCSGIEYIRPLLLLTKGAYTIYVTGQSRQSTRGGSSSNSTGSGSLGGGGGAGGGGCGGTGGGSIGKMGGKGGGSAGSGSGGKSSSSKGAGGKSTGHSLLAGGGGGFLTSSSTGSGHHSSHSGGRNQQNKKRGYMLLGKERFTPWEIYDPSKQPLLLSIHGAVHTEAVLSRVEEQANRLIRHEHFYRISRPRDFYMVPVYPETLEKSNATGVGVGVADSKQSDIGEHENANIMRTIKTENLSIDSNTTNNNAVINNIFSSSNNNSNSGSNPVNSLGGESQMLSLNDIVQMPETNLSECQNQFMQLRNSINNNNNNINNATVISSSNSNTSGGILYDQKHNPSTMPCHSTNLPMFNDTGKPVNQIDSELNPMMIMSSLSSSPSCTNTITHGGGGGGAVGPAGSGNIQLMHGKMTNSRNDNELVDKLSINNQMMLNTFKSSVASVAAGGVLTSSTGLPSSNSHIHQQQLYSHHLPNHQQHQQQQVLVNSDPSLSSGRKLQPQQNLMNEYASLNELDQRPIGISHPGHMNTINYPPTHHSHGHHGHPLEMNMHKGNKMINMEYNERMLPSQSLTVSQQQHIQPPPSVAPLPPSNATILHPPISSNTAIHVPAPPPTTTTTTTTTTTKRKRGSGRRGGGGSLASSRSTTGGNTTRGGLHGNPGGPMNVSYERVVGNNPSVNLYAYNVNNSEQQLSDSSNHQWSGKQNVFNMNLLDIQSQQHHHQQQQQQSHVQQSSSSTRGQHQQQQHLANLSGFLPPTASMRRNITTSGSGGGNISRSIQQSNQQPPPHQIIGHTNTTNTSSATPGPLQQIPQGIPPNPPPYPLSSSNQPQQHTFRIPSDDAYNIMNVNDVGIDEQYRRQTLNPVMNTMHHQQQQQQQPPPHHHHHNQSSTVLSSRVQGAGGGGYDSSSGGQMQTDVQHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQADSQMNTQSRLHASRVMSSSQQQSGQLMRPDMMIASTVIETGVVGGIGGNIPLSSSNNNNSAQLSQHVQNIPHSSYPRYTGY
Length1196
PositionKinase
OrganismTrichobilharzia regenti (Nasal bird schistosome)
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Trematoda> Digenea> Strigeidida> Schistosomatoidea> Schistosomatidae> Trichobilharzia.
Aromaticity0.04
Grand average of hydropathy-0.687
Instability index60.31
Isoelectric point9.03
Molecular weight126128.27
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08605
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     834.91|     146|     148|     757|     902|       1
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  241-  339 (97.96/26.85)	..........................................GSAGSGSGGK.....................SSSSKG...................AGGKST......GHSLLAGGGG.G..FLT.........SSSTGSGHHSS......................HSGGR..NQQnkkrgymlLGK..ERFTPW..eiydPSKQPL....LL....SI....H...............................GAVHTEA..VLSRV
  343-  510 (107.00/29.92)	ANRLIRHEHfyrISRPRDFYmVPVYPETLEKSNAT.......GVG.VGVADSkqsdigehenanimrtiktenLSIDSN...................TTNNNAvinnifSSSNNNSNSGsN..PVNslggesqmLSLNDIV.QMPETNLSECqnqfmqlrnsinnnnnNINNA....T........VIS..SSNSNT......SG..GI....LY....D...QKH...........N.P.............................ST
  521-  661 (127.46/36.87)	FNDT..GKP...VNQ...ID.SELNPMMIM....................SS.....................LSSSPS...................CT..NT.....iTHGGGGGGAV.G..PAG..............SGN...IQLMHG................KMTNSrnDNE........LVDklSINNQMmlntfkSSVASVAAGGVLtsstGLPSSNS...........HiHQQQlyshhlpnhqqhqQQQVLVNSdpSLSSG
  667-  750 (119.49/34.17)	QQ.NLMNEY...ASLNE...................LDQRPIGISHPGHMNT.....................I..NYP...................PTHHS............HGHHG.H..PLE........MNMHK..GNK.MINM.EY................N.........................ERM......LPSQS......L....TV.SQQQ...........H.IQPP.............PS.............
  757-  902 (261.79/82.54)	SNATILHPP...ISSNTAIH.VPAPPPTTTTTTTTTTTKRKRGSGRRGGGGS.....................LASSRS...................TTGGNT......TRGGLHGNPG.G..PMN........VSYERVVGNNPSVNLYAY................NVNNS..EQQ........LSD..SSNHQW......SGKQNVFNMNLL....DIQSQQH...........H.HQQQ.............QQQSHVQQ..SSSST
  906- 1042 (121.22/34.75)	......HQQ....QQHLANL.SGFLPP.TASMRRNITTS...GSG....GGN.....................I..SRSiqqsnqqppphqiightntTNTSSA......TPGPLQQIPQ.GipP..................NPPP...YPL................SSSNQ..PQQ......htFRI..PSDDAY..........NIMNVNDV....GIDEQYRrqtlnpvmntmH.HQQQ.............QQQQ...........
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.06|      30|      95|    1054|    1083|       2
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 1054- 1083 (56.08/27.23)	STVLSSRVQGAGGGGYD.SSSGGQMQTDV.QH
 1150- 1181 (42.98/19.03)	STVIETGVVGGIGGNIPlSSSNNNNSAQLsQH
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      77.34|      14|      16|     208|     221|       3
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  192-  205 (22.81/ 8.60)	TGQSRQSTRGGSSS
  208-  221 (26.99/11.70)	TGSGSLGGGGGAGG
  227-  240 (27.54/12.11)	TGGGSIGKMGGKGG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.55|       9|      90|     950|     960|       4
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  950-  960 (16.93/13.52)	PPPHQiiGHTN
 1043- 1051 (23.62/12.32)	PPPHH..HHHN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08605 with Med12 domain of Kingdom Metazoa
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