<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08561
Description |
Uncharacterized protein |
Sequence | LPDVLAKINFGGVMFTDLGKEHLRMSQLSESRHVVSHPRPGTIPLSTMLEFICQKTYTDLMRLVDLLPSKTDLEKKIELAKFFSRTRNLFIRLEALVKWANSASKVDKCEVTLTLLSEALDFPWRILSISLLVCDPEISAGSPLLHPLQTRFLHSQAQSRILYQHFDKRPPLLHLYEMLHSFSVSVQLNVLFEQAQRLLSRRPADTFVIESYRPGSQLKVRYWLGLSRCHFQAPLGADGKLKQSAYTVTIHTDPLDPQRPLCLTHHPKLSVLDANKIGSIVKDLRTELLPLSPGPITLGDVPLCLYVPLLWPCSERELLYIQVDVAQGLLRTSLAGLTNPTPTITCFGASVGSGEDALCHLLAQPAVNFRSLLRRLEEALNRPAVRRIISEGSTEEPMSAAVRSRSLRALANEEARWQAEMVETLNSLRCLLGQARVAAAVSSHRRFCHSVPRNSLPLVVPSDSGGTPARSVLPCLDLLKRMYQGRAALTFVRLFPCDEYYLVCETVPSGALCVAYRYYLLVCAPIPASTEVFFNADGVMLPSLRQSVSNAQKQLLQRRMKRVRLLLDHLPEGAAKRRCLERLDPHARNLLESSVEVDSNATFPVTATLPVSGLSSLLNTLEEDIISTFLTFQLSLHEISHNGAHYDDQGHILSVDILKIPKGAMPAWVWPGYEALKRYVQRVLLVPSGDSPHCIRVWHMNVAFTGLPTAPFGCGGGANGVGEGTHLYQTADWPTQRLSDLNDVVIAIKKEWISLCSMFTICAPVLSIKGKSTPSICSIDFSLSSPVCPGVILRQFDAKRLTLSYGPGNHFMAELSADSDQGCILSLGTYPVAVPIAEDGKCEGNASLLAPAVSLRPLEINTGDNPHCLIREHLEYLVNTYKSVRHLALVLSSTVEFMTALGSLLRPDFLDMVSMSPSPPARPIGTFALIALSCYDLLLVYRGVLCMRFKLSLGTSLSATSGEMTKLPYSTVAVDTVQLSDGCRNADVSARATGDAATAKDYAPLPAFQAFLTSLQNAFQMDIEGESVCLLSPSASCSFIRSGKRETDSLQLLAYQKMSSVHDKHRIFLTS |
Length | 1071 |
Position | Tail |
Organism | Schistocephalus solidus (Tapeworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Cestoda>
Eucestoda> Diphyllobothriidea> Diphyllobothriidae> Schistocephalus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.058 |
Instability index | 48.55 |
Isoelectric point | 8.21 |
Molecular weight | 118032.39 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP08561
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
5| 655.50| 302| 495| 63| 400| 1
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63- 254 (222.40/170.47) ..............................................................................................................................................................................................................................LVdlLPSKTDLEKKIELAKFFSRTRNLFIRLEAL..VKWANSASKVDKCEvtlTLLSEALDFPWRILsisLLVCDPeISAGSPLLHPLQTRFLHSQAQS.....RILYQHFDKRPPLL..HLYEmlhSFSVSVQLNVLFEQAQRLLSR.....................R....PADTFVIESYRPGSQLKVrYWlGLSRCHFQAPLG.....ADGKLKQSAY.TVTIHTDP
259- 400 (116.11/110.31) RPL..CLTHHP.......KLSVLDANKIGSIVKDlRTELLPLSPGPITLGDVPLCLyvPLLWP.......CSERELLYIQVDVAQGL....LRTSLAGLtnPTPTITCFGASVGSGEDAlcHLlaqpavnfrslLR.RLEEALN.RPAVRRI.ISEGSTEEPMSA.................................................................................................................................................................................................................................................................................................
458- 614 (157.34/88.61) .....................................................................................................................................................................avrsrslralaneearwqaemvetlnslrcllgqarvaaavsshrrfchsvprnslpLV..VPSDSGGTPARSVLPCLDLLKRMYQGRAALtfVRLFPCDEYYLVCE...TVPSGALCVAYRYY...LLVCAP.IPASTEVFFNADGVMLPSLRQSvsnaqKQLLQRRMKRVRLLldHLPE...GAAKRRCLERLDPHARNLLES.....................SvevdSNATFPVTATLPVSGL..........................................
615- 727 (57.79/18.87) SSLlnTLEEDIistfltfQLSLHEISHNGAHYDD.QGHILSVDILKIPKGAMP.....AWVWPgyealkrYVQRVLLVPSGDSPHCIrvwhMNVAFTGL..PTAPFGCGGGANGVGEGT..HL...........................................................................................................................................................................................................................................................................................................................................
860- 978 (101.86/56.98) ..............................................INTGDNPHCL..............................................................................IReHLEYLVNtYKSVRHLaLVLSSTVEFMTA.............................................................................................................................................................................................................lgsllrpdfldmvsmspsppaR....PIGTFALIALSCYDLLLV.YR.GVLCMRFKLSLGtslsaTSGEMTKLPYsTVAVDTVQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.89| 18| 19| 748| 765| 2
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748- 765 (36.42/21.72) IK.KEWISLCSM.FTICAPV
768- 787 (24.47/12.31) IKgKSTPSICSIdFSLSSPV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 42.37| 13| 18| 406| 419| 4
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406- 419 (19.32/17.11) SLRALANeEARWQA
427- 439 (23.06/14.88) SLRCLLG.QARVAA
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