<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP08534

Description Uncharacterized protein
SequenceMDTGASPCAPLVWNQGFPTLLGGHSTSTNPVKAPDIRFSSSQFREQHPRHEKAILKGIKNFWKHKNDEDKETILLNHSILLTHPTFLSLLKVCLPDSDYLIDSLYEQIEYFLLNSRYLVDHLPDNLHTRSIIQKCLKYRLILVGQKFSTIQLDIDSSIRWATLLAQLISHSIIEPESNSKLFYIVYDMLQLLIHTITARSGIEGKHYQTIAKKIRRELMERPPCSGIEYLRPLLLLTKGSYTIFVTGRQPRGGTRGGLSNMSGGSLGSGGGGGSGGSGGGGGVGSSGGGGGTGSGICNNSSNKLNNSKGSNKAGNCLLSNGSRFLTSSSHQLKKYGYQFLGKERFTPWEIYDPSKQSLLLSIHGAINTESILSRIEEQANRLIRHDHFYRMFHPPEFYMAPIYSQILDEEMSGNSVKLGDVGEHDDPNVINKMIKTENSNNNSDGTVGTTNNASISSIFNKGNNTSNSRDVMRESQLLSLNDMVQLSETNLSECSNQFLPISGNNNNNNIRSGDSSGNYHHQSTGVLYDQKHNISSMSCHPTTSLMFNESNPSIKSGNPLDCGNTSMMMSMMMMTTSSGSTNAHTITNSGNNNHNNNSMQLGRGKLLNARNDIEINDKLSLNNRMNAFQSSSSSSGGSLGGGTVGGGGVGVVSSSSSSLQIHSHSQPIHGHHHHQQQMNLDSDQVYTNSTRKLPSQQTVLNDYPNPNELEQQSMNHCVTVAGHINTMTYPLSHHHNHQLDVNLHKTNKLLGMEYNDRLIASQSSTSSQQQIQMNPTGTPSIPPPSNNATMLSTPTNNNVVAGHVLTSAAKTVTTKRKRGSGRRGGGNITDRNSIRPSGATTRGGMHTTGSVNVVGYDRMNSNNNNSNNNSSVNLYSYNIMNPEQQVTEPNHQWTNKQNVYNMNLLEMQQQQQLPSSTRGHHQQQHLANLSGFLRNRAQQHHQQQQQLHPEQSYGSNFSANNSVVLSHQGHVFDQSQMNNQFNQSNAHLIDSPSGSLRRHLTTSGGGAGNVSRSIQQSSQQQSHQILSHTSGTPQQLPPGMPNPPPYPISNHQSQQYSFRAPPSDEANYIMNTNESSIDEQFKRQSVNSAMNSIHQPGTTIMSRSSAYEFPASHLLTDVQSQQQQHHMSYIPSQVDTQLNPSRIHSRIINPSQSNPMIRSDLTPTTIINTGNNNQQQSHMSTIPHSSYSRYTGY
Length1193
PositionKinase
OrganismSchistosoma rodhaini
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Trematoda> Digenea> Strigeidida> Schistosomatoidea> Schistosomatidae> Schistosoma.
Aromaticity0.06
Grand average of hydropathy-0.723
Instability index54.62
Isoelectric point8.91
Molecular weight131246.75
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP08534
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     297.13|      53|      59|     515|     567|       2
---------------------------------------------------------------------------
  515-  554 (63.54/22.27)	.......................SS.......G..NYHH.QST......GVL.YD..QKHNISSMSCH....PTTSLMFNE.SNPSI
  555-  613 (59.37/20.35)	KSGNPLDCGNTSM.mmsmmmmttSS.......GstNAHTiTNS......G....N..NNHNNNSMQL.....GRGKLL.NA.RN.DI
  614-  668 (43.69/13.12)	EINDKLSL.NNRM...nafqsssSSsggslggG..TVGG.GGV......GVV...........SSS.......SSSLQIHS.HSQPI
  670-  706 (35.24/ 9.23)	................................G..HHHH.QQQ......MNLdSD..QVYTNSTRKL.....PSQQTVLNDyPNP..
  892-  958 (57.99/19.71)	QWTNKQNVYNMNLlemqqqqqlpSS.......T..RGHH.QQQhlanlsGFL.RNraQQHHQQQQQLH....PEQSYGSNF.S....
  959-  996 (37.31/10.18)	.ANNSVVLSH.Q....................G..HVFD.QSQ......M....N..NQFNQSNA..HlidsPSGSL..........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.59|      15|      18|     850|     864|       3
---------------------------------------------------------------------------
  850-  864 (27.41/16.46)	SVNVVGYDRMNSNNN
  871-  885 (28.17/17.14)	SVNLYSYNIMNPEQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      80.31|      17|      18|    1117|    1133|       4
---------------------------------------------------------------------------
 1117- 1133 (36.44/17.62)	DVQSQQQQHHMSYI..PSQ
 1135- 1152 (21.74/ 7.32)	DTQLNPSRIH.SRIinPSQ
 1169- 1183 (22.13/ 7.59)	TGNNNQQQSHMSTI..P..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.24|      15|      18|      94|     108|       5
---------------------------------------------------------------------------
   94-  108 (27.14/18.05)	LPDSDYLIDSLYEQI
  112-  126 (27.10/18.02)	LLNSRYLVDHLPDNL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.73|      21|      23|     286|     307|       6
---------------------------------------------------------------------------
  286-  306 (39.51/19.16)	SGGGGGTGSGICNNSSNKLNN
  307-  327 (34.21/19.75)	SKGSNKAGNCLLSNGSRFLTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.06|      13|      17|     816|     829|       7
---------------------------------------------------------------------------
  816-  828 (25.04/ 8.22)	RKRGSGRRGGGNI
  835-  847 (26.02/ 9.28)	RPSGATTRGGMHT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      29.16|       9|      17|    1067|    1079|       8
---------------------------------------------------------------------------
 1067- 1079 (11.81/13.65)	NYIMNtnesSIDE
 1087- 1095 (17.35/ 7.57)	NSAMN....SIHQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      94.69|      23|      24|     419|     441|       9
---------------------------------------------------------------------------
  419-  441 (39.48/24.71)	GDVGEHDD...PNVINKMIKTENSNN
  445-  467 (27.13/14.35)	GTVGTTNNasiSSIFNK...GNNTSN
  469-  490 (28.07/15.14)	RDVMRESQ...LLSLNDMVQLSETN.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.81|      23|      39|     749|     771|      10
---------------------------------------------------------------------------
  749-  771 (37.16/24.91)	LLGMEYNDRLIASQSSTSSQQQI
  790-  812 (36.66/24.46)	MLSTPTNNNVVAGHVLTSAAKTV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.95|      24|      39|     129|     154|      12
---------------------------------------------------------------------------
  129-  154 (35.12/34.34)	RSIIQKCLKYRLILVGqkFSTIQLDI
  170-  193 (40.83/31.90)	HSIIEPESNSKLFYIV..YDMLQLLI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.54|      14|      21|    1025|    1038|      15
---------------------------------------------------------------------------
 1025- 1038 (26.29/13.57)	ILSHTSGTPQ.QLPP
 1048- 1062 (22.25/10.28)	ISNHQSQQYSfRAPP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP08534 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) CSNQFLPISGNNNNNNIRSGDSSGNYHHQSTGVL
2) DPNVINKMIKTENSNNNSDGTVGTTNNASISSIFNKGNNTSNSRDVMRESQLLS
3) GGTRGGLSNMSGGSLGSGGGGGSGGSGGGGGVGSSGGGGGT
4) LGMEYNDRLIASQSSTSSQQQIQMNPTGTPSIPPPSNNATMLSTPTNNNVVAGHVLTSAAKTVTTKRKRGSGRRGGGNITDRNSIRPSGATTRGGMHTTGSVNVVGYDRMNSNNNNSNNNSSVNLYSYNIMNPEQQVTEPNHQWTNKQNVYNMNLLEMQQQQQLPSSTRGHHQQQHLANLSGFLRNRAQQHHQQQQQLHPEQSYGSNFSANNSVVLSHQGHVFDQSQMNNQFNQSNAHLIDSPSGSLRRHLTTSGGGAGNVSRSIQQSSQQQSHQILSHTSGTPQQLPPGMPNPPPYPISNHQSQQYSFRAPPSDEANYIMNTNESSIDEQFKRQSVNSAMNSIHQPGTTIMSRSSAYEFPASHLLTDVQSQQQQHHMSYIPSQVDTQLNPSRIHSRIINPSQSNPMIRSDLTPTTIINTGNNNQQQSHMSTIPHSSYS
5) TSMMMSMMMMTTSSGSTNAHTITNSGNNNHNNNSMQLGRGKLLNARNDIEINDKLSLNNRMNAFQSSSSSSGGSLGGGTVGGGGVGVVSSSSSSLQIHSHSQPIHGHHHHQQQMNLDSDQVYTNSTRKLPSQQTVLNDYPNPNELEQQSMNHCVTVAGHINTMTYPLSHHHNHQLDVNLHKTNK
494
426
252
750
565
527
479
292
1188
748










Molecular Recognition Features






MoRF SequenceStartStop




NANANA